Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               3-535
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 17
               

               Conread position:
               10-184
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               13-327
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               172, 7
               

               Conread position:
               29-596
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 20
               

               Conread position:
               30-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 42
               

               Conread position:
               30-656
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 62
               

               Conread position:
               31-375
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               31-866
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               606
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 179
               

               Conread position:
               36-261
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               36-279
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               139, 58
               

               Conread position:
               41-869
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               620
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 99
               

               Conread position:
               98-414
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               103-312
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               112-297
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 35
               

               Conread position:
               117-549
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               109, 276
               

               Conread position:
               117-725
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               118-330
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               122-534
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 14
               

               Conread position:
               122-581
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               138-760
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               152-903
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               203-901
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 26
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               220-493
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-512
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-542
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-584
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-593
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-902
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               221-363
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               221-881
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 20
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 20
               

               Conread position:
               222-396
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-894
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               223-631
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 120
               

               Conread position:
               223-729
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 120
               

               Conread position:
               223-889
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 130
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               225-894
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 28
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               243-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 88
               

               Conread position:
               246-903
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 100
               

               Conread position:
               258-901
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 73
               

               Conread position:
               268-454
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               268-889
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 156
               

               Conread position:
               270-520
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 74
               

               Conread position:
               276-735
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               279-856
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               280-764
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               282-471
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 61
               
Show alignments to all cow chromosomes.