Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               13-608
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               20-627
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 7
               

               Conread position:
               28-269
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               156, 59
               

               Conread position:
               28-742
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               30-901
               

               Cow position:
               
               

               Alignm length:
               897
               

               Alignm identity:
               648
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               73-664
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 21
               

               Conread position:
               93-338
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 121
               

               Conread position:
               136-901
               

               Cow position:
               
               

               Alignm length:
               794
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               168-358
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               173-338
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               179-889
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 168
               

               Conread position:
               181-706
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 110
               

               Conread position:
               205-901
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 36
               

               Conread position:
               207-903
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               207-903
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               215-669
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               216-901
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 132
               

               Conread position:
               220-493
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               220-559
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-593
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               220-605
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-633
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-633
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 18
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-894
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 122
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               222-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 358
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               223-459
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               120, 126
               

               Conread position:
               223-587
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 126
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 18
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               228-768
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               234-597
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 112
               

               Conread position:
               234-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 120
               

               Conread position:
               234-903
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 188
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               241-594
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-878
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 76
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               246-903
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 100
               

               Conread position:
               259-903
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 85
               
Show alignments to all cow chromosomes.