Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               10-751
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 197
               

               Conread position:
               13-611
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               417
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               173, 15
               

               Conread position:
               23-462
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               28-452
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 65
               

               Conread position:
               28-577
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               28-605
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 38
               

               Conread position:
               28-605
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               28-786
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               29-894
               

               Cow position:
               
               

               Alignm length:
               892
               

               Alignm identity:
               657
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               30-513
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 82
               

               Conread position:
               30-669
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 64
               

               Conread position:
               37-776
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 50
               

               Conread position:
               46-329
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               46-903
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               629
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               57-901
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               658
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               67-298
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 27
               

               Conread position:
               83-886
               

               Cow position:
               
               

               Alignm length:
               837
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               99-901
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 6
               

               Conread position:
               105-295
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               70, 115
               

               Conread position:
               117-512
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               117-604
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               117-623
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               122-520
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               125-903
               

               Cow position:
               
               

               Alignm length:
               791
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               133-738
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               151-650
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 191
               

               Conread position:
               157-572
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               163-512
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 23
               

               Conread position:
               168-339
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               168-339
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               168-901
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               187-903
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 49
               

               Conread position:
               199-903
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 22
               

               Conread position:
               202-901
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               203-903
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               206-903
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 22
               

               Conread position:
               207-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 34
               

               Conread position:
               211-903
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               212-889
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 129
               

               Conread position:
               212-903
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 133
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 26
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               219-600
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               220-384
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               220-519
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 204
               

               Conread position:
               220-633
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-889
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-346
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               221-608
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-709
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 125
               

               Conread position:
               221-837
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 29
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               222-370
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               222-550
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-662
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-843
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 29
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               223-344
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               223-372
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 131
               

               Conread position:
               223-625
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 114
               

               Conread position:
               223-790
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 116
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-897
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 106
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 86
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 122
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               224-894
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 99
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 99
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 115
               

               Conread position:
               230-368
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               127, 11
               

               Conread position:
               234-557
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 75
               

               Conread position:
               234-901
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               235-486
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-627
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-669
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-889
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-896
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 189
               

               Conread position:
               241-901
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 96
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 103
               

               Conread position:
               244-894
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 99
               

               Conread position:
               246-662
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               255-476
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               255-889
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 89
               

               Conread position:
               258-496
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               274-580
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               276-903
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               279-667
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               280-857
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 61
               

               Conread position:
               280-894
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               285-903
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 61
               
Show alignments to all cow chromosomes.