Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               4-226
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 89
               

               Conread position:
               20-903
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               705
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 74
               

               Conread position:
               28-444
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               161, 38
               

               Conread position:
               30-572
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 64
               

               Conread position:
               80-449
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               81-896
               

               Cow position:
               
               

               Alignm length:
               837
               

               Alignm identity:
               639
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               113-659
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               155, 21
               

               Conread position:
               123-731
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               137-542
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               136, 22
               

               Conread position:
               147-903
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               150-901
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               151-640
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               332
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               128, 50
               

               Conread position:
               151-893
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               155-556
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               167-659
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               168-608
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               205-647
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               130, 28
               

               Conread position:
               206-894
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               207-636
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               207-807
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               207-901
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               207-903
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               212-762
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 138
               

               Conread position:
               215-470
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               220-516
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-589
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               220-625
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               221-415
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               130, 122
               

               Conread position:
               221-608
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               221-695
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 118
               

               Conread position:
               221-892
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               222-803
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 200
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               223-379
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               223-784
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               223-784
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               224-432
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 119
               

               Conread position:
               224-669
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               241-371
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-436
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               241-559
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 103
               

               Conread position:
               241-867
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               243-572
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 103
               

               Conread position:
               245-664
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 85
               

               Conread position:
               253-504
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               117, 171
               

               Conread position:
               268-903
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               275-898
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 61
               
Show alignments to all cow chromosomes.