Cow genome map

Conread name: Tra1-TCH01G050069

Conread position: 4-226
Cow position: chr4:21565284-21565501 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 89

Conread position: 20-903
Cow position: chr4:46664314-46665213 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 705
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 74

Conread position: 28-444
Cow position: chr4:14549806-14550203 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 271
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 161, 38

Conread position: 30-572
Cow position: chr4:28831168-28831687 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 64

Conread position: 80-449
Cow position: chr4:11385617-11385969 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 53

Conread position: 81-896
Cow position: chr4:60264297-60263477 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 13

Conread position: 113-659
Cow position: chr4:50980122-50980651 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 348
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 155, 21

Conread position: 123-731
Cow position: chr4:51043358-51042736 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 137-542
Cow position: chr4:19093344-19093746 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 22

Conread position: 147-903
Cow position: chr4:13869949-13870706 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 150-901
Cow position: chr4:34184591-34183845 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 151-640
Cow position: chr4:22472465-22472943 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 332
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 128, 50

Conread position: 151-893
Cow position: chr4:44925585-44924837 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 155-556
Cow position: chr4:1496451-1496055 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 34, 52

Conread position: 167-659
Cow position: chr4:19251512-19251992 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 285
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 30

Conread position: 168-608
Cow position: chr4:14821600-14821165 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 88

Conread position: 205-647
Cow position: chr4:4176779-4177216 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 28

Conread position: 206-894
Cow position: chr4:25599511-25598809 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 207-636
Cow position: chr4:44725073-44725507 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 207-807
Cow position: chr4:26886871-26886260 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 34

Conread position: 207-901
Cow position: chr4:31669261-31669967 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 34

Conread position: 207-903
Cow position: chr4:43881098-43881803 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 34

Conread position: 212-762
Cow position: chr4:100950-100385 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 138

Conread position: 215-470
Cow position: chr4:12587296-12587551 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 26

Conread position: 220-516
Cow position: chr4:33493827-33494123 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 21

Conread position: 220-589
Cow position: chr4:41120306-41120691 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 21

Conread position: 220-625
Cow position: chr4:45049296-45048887 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 220-894
Cow position: chr4:12241215-12240536 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 21

Conread position: 220-903
Cow position: chr4:6490362-6489666 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 220-903
Cow position: chr4:18516899-18517596 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 13

Conread position: 220-903
Cow position: chr4:43319644-43318945 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 221-415
Cow position: chr4:602989-603185 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 122

Conread position: 221-608
Cow position: chr4:17926251-17925859 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 20

Conread position: 221-695
Cow position: chr4:13548025-13548512 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 118

Conread position: 221-892
Cow position: chr4:36896371-36897057 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 20

Conread position: 222-803
Cow position: chr4:16326779-16326179 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 222-901
Cow position: chr4:355913-356603 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 222-901
Cow position: chr4:48026400-48027094 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 200

Conread position: 222-903
Cow position: chr4:31565300-31564612 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 19

Conread position: 223-379
Cow position: chr4:66926000-66926151 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 109

Conread position: 223-784
Cow position: chr4:41954472-41955037 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 223-784
Cow position: chr4:41958127-41958702 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 223-894
Cow position: chr4:18190403-18191081 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-901
Cow position: chr4:3125793-3126484 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-903
Cow position: chr4:18424527-18423828 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 224-432
Cow position: chr4:27333433-27333642 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 119

Conread position: 224-669
Cow position: chr4:16359888-16360322 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 17

Conread position: 235-894
Cow position: chr4:5880174-5880839 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 235-903
Cow position: chr4:4416091-4416768 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 115

Conread position: 235-903
Cow position: chr4:32212176-32212867 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 241-371
Cow position: chr4:158531-158661 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 102

Conread position: 241-436
Cow position: chr4:65223518-65223322 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 115, 105

Conread position: 241-559
Cow position: chr4:6268616-6268289 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 103

Conread position: 241-867
Cow position: chr4:1930608-1929972 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 243-572
Cow position: chr4:9354758-9354425 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 103

Conread position: 245-664
Cow position: chr4:16056621-16057043 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 85

Conread position: 253-504
Cow position: chr4:21256382-21256639 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 171

Conread position: 268-903
Cow position: chr4:33072777-33072123 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 6

Conread position: 275-898
Cow position: chr4:13493365-13494010 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Show alignments to all cow chromosomes.