Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               3-889
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               643
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               13-328
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               100, 7
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               169, 15
               

               Conread position:
               20-603
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 67
               

               Conread position:
               26-327
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               189, 52
               

               Conread position:
               28-329
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               28-658
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               414, 66
               

               Conread position:
               29-762
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 70
               

               Conread position:
               30-376
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               30-578
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               31-903
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               635
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               32-608
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 53
               

               Conread position:
               73-296
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 178
               

               Conread position:
               99-368
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 118
               

               Conread position:
               104-903
               

               Cow position:
               
               

               Alignm length:
               833
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 111
               

               Conread position:
               108-901
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               117-602
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               123-736
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               413
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               150-903
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 198
               

               Conread position:
               168-362
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 5
               

               Conread position:
               185-508
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               194-903
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               201-888
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 20
               

               Conread position:
               207-475
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               212-504
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 136
               

               Conread position:
               212-901
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 131
               

               Conread position:
               215-892
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 26
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               216-396
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               220-627
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 30
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-479
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               137, 122
               

               Conread position:
               221-894
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               221-899
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               222-478
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 124
               

               Conread position:
               222-798
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 29
               

               Conread position:
               223-370
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-370
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-605
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 57
               

               Conread position:
               223-669
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-761
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               223-790
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 10
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 108
               

               Conread position:
               223-902
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               223-902
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               235-354
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               235-468
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               235-605
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-751
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               235-891
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               241-556
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               241-631
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 192
               

               Conread position:
               241-803
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-891
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               247-735
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               255-894
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               263-903
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               269-903
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               269-903
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 74
               

               Conread position:
               275-888
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 92
               

               Conread position:
               280-892
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               281-894
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               291-481
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               348-862
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 74
               
Show alignments to all cow chromosomes.