Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               13-783
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 10
               

               Conread position:
               13-819
               

               Cow position:
               
               

               Alignm length:
               862
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 7
               

               Conread position:
               20-313
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               156, 46
               

               Conread position:
               24-740
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               28-545
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 66
               

               Conread position:
               30-376
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               65, 138
               

               Conread position:
               30-669
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 223
               

               Conread position:
               44-493
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               89-852
               

               Cow position:
               
               

               Alignm length:
               791
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               93-633
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               107-902
               

               Cow position:
               
               

               Alignm length:
               821
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 127
               

               Conread position:
               116-436
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               117-659
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               149-664
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               350
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               162-710
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 184
               

               Conread position:
               168-894
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               187-426
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               197-760
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               198-903
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               206-611
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 35
               

               Conread position:
               206-901
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               215-610
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               215-611
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 28
               

               Conread position:
               216-423
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 128
               

               Conread position:
               216-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 132
               

               Conread position:
               220-362
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-493
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               220-533
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-593
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               220-596
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               220-660
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               220-669
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               221-544
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               221-733
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               221-889
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               222-361
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               129, 121
               

               Conread position:
               222-589
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 19
               

               Conread position:
               222-600
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-618
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               222-629
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 81
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 202
               

               Conread position:
               223-339
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               223-339
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               223-669
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 108
               

               Conread position:
               223-751
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 118
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               224-602
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               224-894
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               225-480
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               132, 118
               

               Conread position:
               230-860
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               231-902
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 115
               

               Conread position:
               235-386
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 113
               

               Conread position:
               235-609
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-735
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 110
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               240-903
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 183
               

               Conread position:
               241-601
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               241-611
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               245-737
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 48
               

               Conread position:
               246-874
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               246-901
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 97
               

               Conread position:
               246-903
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 57
               

               Conread position:
               256-569
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 166
               

               Conread position:
               260-848
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               261-894
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 78
               

               Conread position:
               265-899
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 78
               

               Conread position:
               269-546
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               269-903
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               274-891
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               274-901
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               281-894
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               282-493
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 64
               
Show alignments to all cow chromosomes.