Cow genome map
Conread name: | Tra1-TCH01G050069 |
Conread position: | 13-783 |
Cow position: | chr6:15476937-15477725 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 10 |
Conread position: | 13-819 |
Cow position: | chr6:66541652-66542500 (view UCSC Genome Browser custom track) |
Alignm length: | 862 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 7 |
Conread position: | 20-313 |
Cow position: | chr6:42616496-42616792 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 213 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 156, 46 |
Conread position: | 24-740 |
Cow position: | chr6:7179234-7178505 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 12 |
Conread position: | 28-545 |
Cow position: | chr6:35419776-35419284 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 66 |
Conread position: | 30-376 |
Cow position: | chr6:6476118-6475765 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 248 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 65, 138 |
Conread position: | 30-669 |
Cow position: | chr6:10643586-10644225 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 223 |
Conread position: | 44-493 |
Cow position: | chr6:33995267-33994816 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 41 |
Conread position: | 89-852 |
Cow position: | chr6:38901067-38900293 (view UCSC Genome Browser custom track) |
Alignm length: | 791 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 53 |
Conread position: | 93-633 |
Cow position: | chr6:1100077-1099532 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 29 |
Conread position: | 107-902 |
Cow position: | chr6:8021043-8021812 (view UCSC Genome Browser custom track) |
Alignm length: | 821 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 127 |
Conread position: | 116-436 |
Cow position: | chr6:17245418-17245102 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 214 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 78, 13 |
Conread position: | 117-659 |
Cow position: | chr6:60169034-60168515 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 339 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 155, 29 |
Conread position: | 149-664 |
Cow position: | chr6:31566039-31565510 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 350 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 162-710 |
Cow position: | chr6:44550918-44550358 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 184 |
Conread position: | 168-894 |
Cow position: | chr6:1822445-1821702 (view UCSC Genome Browser custom track) |
Alignm length: | 750 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 187-426 |
Cow position: | chr6:43607492-43607259 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 37, 26 |
Conread position: | 197-760 |
Cow position: | chr6:65841801-65842369 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 46 |
Conread position: | 198-903 |
Cow position: | chr6:40554364-40553643 (view UCSC Genome Browser custom track) |
Alignm length: | 747 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 31 |
Conread position: | 206-611 |
Cow position: | chr6:36526273-36526679 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 35 |
Conread position: | 206-901 |
Cow position: | chr6:47042972-47042271 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 9 |
Conread position: | 215-610 |
Cow position: | chr6:39437781-39438172 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 26 |
Conread position: | 215-611 |
Cow position: | chr6:30274945-30274550 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 28 |
Conread position: | 216-423 |
Cow position: | chr6:4508192-4507984 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 139, 128 |
Conread position: | 216-903 |
Cow position: | chr6:30479332-30480034 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 132 |
Conread position: | 220-362 |
Cow position: | chr6:702189-702330 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-493 |
Cow position: | chr6:25214493-25214766 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 30 |
Conread position: | 220-533 |
Cow position: | chr6:8201976-8202292 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-593 |
Cow position: | chr6:15280313-15279947 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 21 |
Conread position: | 220-596 |
Cow position: | chr6:28063567-28063947 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 220-660 |
Cow position: | chr6:29311730-29312174 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 21 |
Conread position: | 220-669 |
Cow position: | chr6:34892767-34892314 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 21 |
Conread position: | 220-901 |
Cow position: | chr6:8761066-8760360 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 21 |
Conread position: | 220-903 |
Cow position: | chr6:5949540-5948844 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 21 |
Conread position: | 220-903 |
Cow position: | chr6:15140941-15140244 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 21 |
Conread position: | 220-903 |
Cow position: | chr6:20560873-20560169 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 21 |
Conread position: | 220-903 |
Cow position: | chr6:24239304-24239986 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 21 |
Conread position: | 221-544 |
Cow position: | chr6:55544087-55543759 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 20 |
Conread position: | 221-733 |
Cow position: | chr6:24323149-24322623 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 125 |
Conread position: | 221-735 |
Cow position: | chr6:69221978-69221450 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 125 |
Conread position: | 221-889 |
Cow position: | chr6:65928202-65928879 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 122 |
Conread position: | 222-361 |
Cow position: | chr6:913893-914032 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 129, 121 |
Conread position: | 222-589 |
Cow position: | chr6:58026993-58027358 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 19 |
Conread position: | 222-600 |
Cow position: | chr6:3277710-3277340 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 19 |
Conread position: | 222-618 |
Cow position: | chr6:40867321-40866926 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 19 |
Conread position: | 222-629 |
Cow position: | chr6:13317265-13316859 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 81 |
Conread position: | 222-901 |
Cow position: | chr6:17046294-17046982 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 19 |
Conread position: | 222-903 |
Cow position: | chr6:35876478-35875783 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 533 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 202 |
Conread position: | 223-339 |
Cow position: | chr6:33389083-33389200 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 223-339 |
Cow position: | chr6:59919044-59918928 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 223-369 |
Cow position: | chr6:19454156-19454302 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 13, 121 |
Conread position: | 223-669 |
Cow position: | chr6:17598045-17597605 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 108 |
Conread position: | 223-751 |
Cow position: | chr6:39908761-39909300 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 223-901 |
Cow position: | chr6:52693264-52693946 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 223-903 |
Cow position: | chr6:13104292-13104991 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 120 |
Conread position: | 223-903 |
Cow position: | chr6:13944141-13944840 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 118 |
Conread position: | 223-903 |
Cow position: | chr6:43617949-43618649 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 224-602 |
Cow position: | chr6:64715471-64715848 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 123 |
Conread position: | 224-894 |
Cow position: | chr6:6566847-6567513 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 116 |
Conread position: | 225-480 |
Cow position: | chr6:3544726-3544983 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 132, 118 |
Conread position: | 230-860 |
Cow position: | chr6:28275225-28275867 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 11 |
Conread position: | 231-902 |
Cow position: | chr6:331224-330536 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 115 |
Conread position: | 235-386 |
Cow position: | chr6:28491269-28491116 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 113 |
Conread position: | 235-609 |
Cow position: | chr6:65821881-65821500 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 109 |
Conread position: | 235-735 |
Cow position: | chr6:10499479-10498964 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 112 |
Conread position: | 235-894 |
Cow position: | chr6:16052124-16052802 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 109 |
Conread position: | 235-894 |
Cow position: | chr6:27169826-27170497 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 109 |
Conread position: | 235-903 |
Cow position: | chr6:2374945-2375631 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 110 |
Conread position: | 235-903 |
Cow position: | chr6:40251908-40252592 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 56 |
Conread position: | 235-903 |
Cow position: | chr6:40275333-40276020 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 109 |
Conread position: | 240-903 |
Cow position: | chr6:13847276-13847960 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 183 |
Conread position: | 241-601 |
Cow position: | chr6:68027044-68027407 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 59 |
Conread position: | 241-611 |
Cow position: | chr6:1411688-1411316 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 42 |
Conread position: | 241-903 |
Cow position: | chr6:44150304-44149623 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 105 |
Conread position: | 245-737 |
Cow position: | chr6:65914458-65914959 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 48 |
Conread position: | 246-874 |
Cow position: | chr6:10631315-10631946 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 128 |
Conread position: | 246-901 |
Cow position: | chr6:51086203-51086873 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 97 |
Conread position: | 246-903 |
Cow position: | chr6:28105590-28104929 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 57 |
Conread position: | 256-569 |
Cow position: | chr6:14852310-14851992 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 166 |
Conread position: | 260-848 |
Cow position: | chr6:3889209-3888620 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 261-894 |
Cow position: | chr6:12666041-12665397 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 78 |
Conread position: | 265-899 |
Cow position: | chr6:40315666-40316311 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 78 |
Conread position: | 269-546 |
Cow position: | chr6:25794056-25794335 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 5 |
Conread position: | 269-903 |
Cow position: | chr6:27470885-27471532 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 5 |
Conread position: | 274-891 |
Cow position: | chr6:44032077-44032711 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 69 |
Conread position: | 274-901 |
Cow position: | chr6:43793425-43792787 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 65 |
Conread position: | 281-894 |
Cow position: | chr6:26670575-26669943 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 65 |
Conread position: | 282-493 |
Cow position: | chr6:41656986-41656778 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 98, 64 |
Show alignments to all cow chromosomes.