Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               5-901
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               679
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               13-611
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               407
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               134, 28
               

               Conread position:
               13-711
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               448
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               176, 15
               

               Conread position:
               28-664
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 66
               

               Conread position:
               29-611
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 37
               

               Conread position:
               29-901
               

               Cow position:
               
               

               Alignm length:
               912
               

               Alignm identity:
               672
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 65
               

               Conread position:
               30-266
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               140, 55
               

               Conread position:
               30-327
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               30-525
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               30-659
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 72
               

               Conread position:
               31-903
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               629
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 63
               

               Conread position:
               36-362
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               61-282
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               65-378
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               292, 29
               

               Conread position:
               93-356
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 189
               

               Conread position:
               108-361
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 181
               

               Conread position:
               113-537
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               117-535
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 54
               

               Conread position:
               124-321
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               124-368
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               140-893
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               147-550
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               152-432
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               162-768
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               199-903
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 17
               

               Conread position:
               199-903
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               215-481
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 35
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               220-575
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-578
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 21
               

               Conread position:
               220-617
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 33
               

               Conread position:
               221-425
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               136, 125
               

               Conread position:
               221-623
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-784
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               222-337
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-438
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               222-622
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 78
               

               Conread position:
               222-633
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               222-889
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               223-542
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-611
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               223-711
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 70
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 209
               

               Conread position:
               225-893
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               231-559
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 117
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               236-603
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               241-837
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               244-496
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 99
               

               Conread position:
               246-782
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 178
               

               Conread position:
               246-894
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 84
               

               Conread position:
               248-496
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               169, 88
               

               Conread position:
               255-901
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 88
               

               Conread position:
               260-650
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               261-740
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               274-508
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 49
               

               Conread position:
               274-899
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               275-508
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               277-901
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               281-601
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               283-903
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               288-669
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 76
               
Show alignments to all cow chromosomes.