Cow genome map

Conread name: Tra1-TCH01G050069

Conread position: 20-212
Cow position: chr8:16083991-16084184 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 76

Conread position: 28-659
Cow position: chr8:42468065-42468675 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 29-901
Cow position: chr8:38606870-38605994 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 30-166
Cow position: chr8:33430578-33430713 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 63

Conread position: 30-466
Cow position: chr8:61034693-61034257 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 18

Conread position: 30-665
Cow position: chr8:24419885-24419262 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 191

Conread position: 30-889
Cow position: chr8:11969944-11969087 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 31-276
Cow position: chr8:44076244-44075993 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 124, 63

Conread position: 47-608
Cow position: chr8:58186857-58186310 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 47

Conread position: 48-595
Cow position: chr8:45169221-45168692 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 355
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 44

Conread position: 70-531
Cow position: chr8:47673527-47673982 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 19

Conread position: 76-669
Cow position: chr8:42161041-42160462 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 93-414
Cow position: chr8:45692761-45692449 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 96

Conread position: 104-893
Cow position: chr8:11563944-11564730 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 510
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 142

Conread position: 117-559
Cow position: chr8:24874712-24874259 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 69

Conread position: 122-602
Cow position: chr8:19188649-19189127 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 85

Conread position: 145-386
Cow position: chr8:33430837-33431082 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 22

Conread position: 152-798
Cow position: chr8:47361627-47360953 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 167-565
Cow position: chr8:42658395-42657994 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 19

Conread position: 168-430
Cow position: chr8:12717430-12717686 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 17

Conread position: 171-903
Cow position: chr8:42419968-42419227 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 185-637
Cow position: chr8:45160590-45160130 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 35

Conread position: 186-339
Cow position: chr8:45316622-45316468 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 5

Conread position: 198-901
Cow position: chr8:7161387-7162106 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 207-756
Cow position: chr8:12449451-12450012 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 9

Conread position: 207-894
Cow position: chr8:49214930-49215643 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 34

Conread position: 207-903
Cow position: chr8:14591399-14590690 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 43

Conread position: 215-903
Cow position: chr8:5016692-5017391 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 26

Conread position: 215-903
Cow position: chr8:11832208-11832921 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 26

Conread position: 216-502
Cow position: chr8:12542935-12542655 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 216-903
Cow position: chr8:47661813-47661108 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 25

Conread position: 216-903
Cow position: chr8:60060892-60061595 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 25

Conread position: 220-629
Cow position: chr8:38390884-38391291 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-695
Cow position: chr8:36636028-36635544 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-889
Cow position: chr8:25408240-25408923 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 21

Conread position: 220-901
Cow position: chr8:32319033-32318343 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 220-901
Cow position: chr8:39195701-39195006 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 220-901
Cow position: chr8:42484428-42485125 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 21

Conread position: 220-903
Cow position: chr8:19050992-19051687 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 30

Conread position: 220-903
Cow position: chr8:33588890-33589587 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 221-436
Cow position: chr8:9275520-9275737 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 125

Conread position: 221-493
Cow position: chr8:45797806-45797533 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 125

Conread position: 221-600
Cow position: chr8:47885538-47885915 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 89

Conread position: 221-735
Cow position: chr8:15711907-15711379 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 125

Conread position: 221-763
Cow position: chr8:1348725-1348170 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 221-795
Cow position: chr8:6683956-6684548 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 221-889
Cow position: chr8:23771152-23771832 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 20

Conread position: 221-901
Cow position: chr8:2170863-2170165 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 202

Conread position: 221-901
Cow position: chr8:3856498-3855816 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 20

Conread position: 221-901
Cow position: chr8:8911023-8911710 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 20

Conread position: 221-901
Cow position: chr8:24915822-24915127 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 21

Conread position: 221-903
Cow position: chr8:4686913-4687614 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 20

Conread position: 221-903
Cow position: chr8:17311536-17312235 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 30

Conread position: 221-903
Cow position: chr8:34348187-34348885 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 120

Conread position: 221-903
Cow position: chr8:37931600-37932302 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 222-593
Cow position: chr8:51667778-51667425 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 124

Conread position: 222-664
Cow position: chr8:19330253-19330699 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 19

Conread position: 222-669
Cow position: chr8:10743113-10742652 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 222-889
Cow position: chr8:25522917-25523598 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 19

Conread position: 222-889
Cow position: chr8:50994303-50994966 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 28

Conread position: 222-894
Cow position: chr8:25776155-25775474 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 222-901
Cow position: chr8:11821830-11822485 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 7

Conread position: 222-903
Cow position: chr8:44244056-44243369 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 28

Conread position: 223-718
Cow position: chr8:47074783-47075288 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 100

Conread position: 223-801
Cow position: chr8:46944401-46943799 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 204

Conread position: 223-825
Cow position: chr8:21158316-21157718 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 75

Conread position: 223-901
Cow position: chr8:2886262-2886956 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 120

Conread position: 223-901
Cow position: chr8:8518072-8517380 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 120

Conread position: 223-903
Cow position: chr8:1319556-1320252 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 32

Conread position: 224-472
Cow position: chr8:8229262-8229014 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 122

Conread position: 224-903
Cow position: chr8:11802339-11803035 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 119

Conread position: 235-894
Cow position: chr8:6065246-6064576 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 235-894
Cow position: chr8:47069283-47068612 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 235-901
Cow position: chr8:1153785-1153111 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 117

Conread position: 241-894
Cow position: chr8:9735776-9736439 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 241-901
Cow position: chr8:32631498-32630819 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 241-903
Cow position: chr8:8556619-8555937 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 241-903
Cow position: chr8:30891786-30891104 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 241-903
Cow position: chr8:32437551-32436871 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 105

Conread position: 244-903
Cow position: chr8:10748896-10749575 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 89

Conread position: 246-893
Cow position: chr8:30487849-30487183 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 259-569
Cow position: chr8:9275729-9276045 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 87

Conread position: 261-901
Cow position: chr8:50930575-50929921 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 269-903
Cow position: chr8:22571753-22571098 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 77

Conread position: 274-901
Cow position: chr8:34108411-34109072 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 47

Conread position: 275-510
Cow position: chr8:44694381-44694616 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 78

Conread position: 275-901
Cow position: chr8:50288357-50287716 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 275-903
Cow position: chr8:14928315-14927667 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 71

Conread position: 280-901
Cow position: chr8:8401541-8400907 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 64

Conread position: 293-901
Cow position: chr8:11762526-11763149 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 81

Conread position: 294-515
Cow position: chr8:25420588-25420365 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 132

Conread position: 303-650
Cow position: chr8:44074912-44074573 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Show alignments to all cow chromosomes.