Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               20-212
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               28-659
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               29-901
               

               Cow position:
               
               

               Alignm length:
               898
               

               Alignm identity:
               672
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               30-166
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               117, 63
               

               Conread position:
               30-466
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               30-665
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 191
               

               Conread position:
               30-889
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               655
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               31-276
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               47-608
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 47
               

               Conread position:
               48-595
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               70-531
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 19
               

               Conread position:
               76-669
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               93-414
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               104-893
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               510
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               71, 142
               

               Conread position:
               117-559
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               122-602
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 85
               

               Conread position:
               145-386
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               152-798
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               167-565
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               168-430
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               171-903
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               185-637
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 35
               

               Conread position:
               186-339
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               198-901
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 17
               

               Conread position:
               207-756
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 9
               

               Conread position:
               207-894
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               207-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 43
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               216-502
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               216-903
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               216-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 25
               

               Conread position:
               220-629
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-695
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-889
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 30
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-436
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 125
               

               Conread position:
               221-493
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               221-600
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 89
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 125
               

               Conread position:
               221-763
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-795
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-889
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 202
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 30
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 120
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               222-593
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 124
               

               Conread position:
               222-664
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               222-669
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 29
               

               Conread position:
               222-889
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               222-889
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               222-894
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 7
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               223-718
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               223-801
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 204
               

               Conread position:
               223-825
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 75
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 32
               

               Conread position:
               224-472
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 122
               

               Conread position:
               224-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 119
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               235-901
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               241-894
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-901
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 103
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 105
               

               Conread position:
               244-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 89
               

               Conread position:
               246-893
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               259-569
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 87
               

               Conread position:
               261-901
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 82
               

               Conread position:
               269-903
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 77
               

               Conread position:
               274-901
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               275-510
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               275-901
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               275-903
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               280-901
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               293-901
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               294-515
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               303-650
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 43
               
Show alignments to all cow chromosomes.