Cow genome map
Conread name: | Tra1-TCH01G050069 |
Conread position: | 28-468 |
Cow position: | chr9:7012698-7013122 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 304 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 147, 55 |
Conread position: | 30-268 |
Cow position: | chr9:34721448-34721689 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 154, 46 |
Conread position: | 30-632 |
Cow position: | chr9:28688069-28688681 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 49 |
Conread position: | 30-776 |
Cow position: | chr9:3803307-3804076 (view UCSC Genome Browser custom track) |
Alignm length: | 780 |
Alignm identity: | 581 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 65 |
Conread position: | 30-901 |
Cow position: | chr9:44818170-44819007 (view UCSC Genome Browser custom track) |
Alignm length: | 891 |
Alignm identity: | 646 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 63 |
Conread position: | 31-339 |
Cow position: | chr9:2001032-2000716 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 61 |
Conread position: | 31-901 |
Cow position: | chr9:9705528-9706402 (view UCSC Genome Browser custom track) |
Alignm length: | 900 |
Alignm identity: | 626 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 65 |
Conread position: | 37-894 |
Cow position: | chr9:64119216-64120066 (view UCSC Genome Browser custom track) |
Alignm length: | 884 |
Alignm identity: | 613 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 48 |
Conread position: | 38-277 |
Cow position: | chr9:44795053-44795294 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 61-611 |
Cow position: | chr9:59511390-59511945 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 41 |
Conread position: | 70-264 |
Cow position: | chr9:43663577-43663768 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 102, 32 |
Conread position: | 70-447 |
Cow position: | chr9:3354666-3354290 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 24 |
Conread position: | 73-296 |
Cow position: | chr9:6110537-6110311 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 163 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 115, 17 |
Conread position: | 104-777 |
Cow position: | chr9:59425806-59426505 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 126 |
Conread position: | 104-861 |
Cow position: | chr9:30487600-30488388 (view UCSC Genome Browser custom track) |
Alignm length: | 798 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 24 |
Conread position: | 105-608 |
Cow position: | chr9:13476841-13476326 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 105-901 |
Cow position: | chr9:52291461-52292267 (view UCSC Genome Browser custom track) |
Alignm length: | 829 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 142 |
Conread position: | 108-391 |
Cow position: | chr9:63854626-63854915 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 76, 41 |
Conread position: | 110-729 |
Cow position: | chr9:29328716-29329341 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 132 |
Conread position: | 117-759 |
Cow position: | chr9:4281829-4282487 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 117-891 |
Cow position: | chr9:3937362-3936584 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 180 |
Conread position: | 142-901 |
Cow position: | chr9:20309059-20308288 (view UCSC Genome Browser custom track) |
Alignm length: | 789 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 13 |
Conread position: | 149-608 |
Cow position: | chr9:42556008-42556482 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 192 |
Conread position: | 151-677 |
Cow position: | chr9:7091082-7091616 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 353 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 156-631 |
Cow position: | chr9:60464526-60464059 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 87 |
Conread position: | 168-368 |
Cow position: | chr9:37129421-37129234 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 68, 5 |
Conread position: | 168-629 |
Cow position: | chr9:1980103-1980564 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 5 |
Conread position: | 185-467 |
Cow position: | chr9:12061688-12061976 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 198 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 194-903 |
Cow position: | chr9:42569039-42569766 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 151 |
Conread position: | 203-903 |
Cow position: | chr9:3566704-3565983 (view UCSC Genome Browser custom track) |
Alignm length: | 727 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 231 |
Conread position: | 207-891 |
Cow position: | chr9:47002344-47003042 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 34 |
Conread position: | 207-901 |
Cow position: | chr9:30672520-30673226 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 35 |
Conread position: | 207-903 |
Cow position: | chr9:18509648-18508950 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 34 |
Conread position: | 212-356 |
Cow position: | chr9:34242449-34242304 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 24, 133 |
Conread position: | 215-901 |
Cow position: | chr9:29028038-29027351 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 26 |
Conread position: | 215-901 |
Cow position: | chr9:60277859-60277155 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 26 |
Conread position: | 218-894 |
Cow position: | chr9:59536260-59536949 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 126 |
Conread position: | 220-901 |
Cow position: | chr9:4532659-4533351 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-901 |
Cow position: | chr9:9013266-9013954 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 21 |
Conread position: | 220-901 |
Cow position: | chr9:16175935-16176629 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-901 |
Cow position: | chr9:27034848-27035542 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 21 |
Conread position: | 220-902 |
Cow position: | chr9:10321976-10322665 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-902 |
Cow position: | chr9:37971043-37970335 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 21 |
Conread position: | 220-903 |
Cow position: | chr9:5004162-5004834 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 12 |
Conread position: | 220-903 |
Cow position: | chr9:29628579-29627890 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 21 |
Conread position: | 220-903 |
Cow position: | chr9:51182026-51181321 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 21 |
Conread position: | 221-528 |
Cow position: | chr9:49177666-49177354 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 125 |
Conread position: | 221-611 |
Cow position: | chr9:31064594-31064989 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 120 |
Conread position: | 221-669 |
Cow position: | chr9:64018300-64017847 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 125 |
Conread position: | 221-901 |
Cow position: | chr9:37162645-37161953 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 110 |
Conread position: | 221-903 |
Cow position: | chr9:42309850-42310543 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 20 |
Conread position: | 221-903 |
Cow position: | chr9:51210843-51211543 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 122 |
Conread position: | 222-493 |
Cow position: | chr9:25023131-25022863 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 19 |
Conread position: | 222-523 |
Cow position: | chr9:6050879-6050576 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 220 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 136, 19 |
Conread position: | 222-537 |
Cow position: | chr9:7002952-7003271 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 19 |
Conread position: | 222-669 |
Cow position: | chr9:6830340-6829895 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 19 |
Conread position: | 222-782 |
Cow position: | chr9:59444020-59444579 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 17 |
Conread position: | 222-903 |
Cow position: | chr9:22653735-22654435 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 200 |
Conread position: | 222-903 |
Cow position: | chr9:59173991-59173285 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 207 |
Conread position: | 223-369 |
Cow position: | chr9:10315537-10315679 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 223-454 |
Cow position: | chr9:25484034-25484266 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 223-457 |
Cow position: | chr9:60651549-60651314 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 223-537 |
Cow position: | chr9:2186136-2186445 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 220 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 98, 30 |
Conread position: | 223-642 |
Cow position: | chr9:25035682-25035258 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 123 |
Conread position: | 223-891 |
Cow position: | chr9:222363-221679 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 108 |
Conread position: | 223-894 |
Cow position: | chr9:28678136-28678822 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 223-894 |
Cow position: | chr9:45873510-45874186 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 118 |
Conread position: | 223-901 |
Cow position: | chr9:131026-130330 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 119 |
Conread position: | 223-903 |
Cow position: | chr9:17064220-17063526 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 31 |
Conread position: | 224-436 |
Cow position: | chr9:1995743-1995531 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 128, 50 |
Conread position: | 224-903 |
Cow position: | chr9:7061922-7061220 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 17 |
Conread position: | 234-793 |
Cow position: | chr9:2487956-2487359 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 143 |
Conread position: | 234-889 |
Cow position: | chr9:3006070-3005404 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 112 |
Conread position: | 235-491 |
Cow position: | chr9:25755049-25754792 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 112 |
Conread position: | 235-664 |
Cow position: | chr9:27934263-27934697 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 45 |
Conread position: | 235-889 |
Cow position: | chr9:36724676-36725347 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 109 |
Conread position: | 235-903 |
Cow position: | chr9:780630-779947 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 112 |
Conread position: | 241-425 |
Cow position: | chr9:163322-163137 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 139 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 115, 105 |
Conread position: | 241-481 |
Cow position: | chr9:16268553-16268794 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 102 |
Conread position: | 244-848 |
Cow position: | chr9:30826866-30827482 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 72 |
Conread position: | 244-894 |
Cow position: | chr9:1076013-1075365 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 102 |
Conread position: | 244-901 |
Cow position: | chr9:1251810-1251138 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 247-899 |
Cow position: | chr9:28439996-28440665 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 96 |
Conread position: | 270-629 |
Cow position: | chr9:59455051-59454691 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 77 |
Conread position: | 274-465 |
Cow position: | chr9:6974941-6975133 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 61, 38 |
Conread position: | 274-467 |
Cow position: | chr9:21381081-21380888 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 69, 78 |
Conread position: | 274-894 |
Cow position: | chr9:50790928-50791564 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 69 |
Conread position: | 275-669 |
Cow position: | chr9:3543060-3543460 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 68 |
Conread position: | 310-611 |
Cow position: | chr9:44795528-44795820 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 31 |
Show alignments to all cow chromosomes.