Cow genome map

Conread name: Tra1-TCH01G050069

Conread position: 13-892
Cow position: chrX:2012776-2011940 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 15

Conread position: 13-894
Cow position: chrX:13052898-13053765 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 13-902
Cow position: chrX:6282881-6281992 (view UCSC Genome Browser custom track)
Alignm length: 917
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 63

Conread position: 23-728
Cow position: chrX:17668006-17667294 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 67

Conread position: 28-260
Cow position: chrX:18611231-18611460 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 28-291
Cow position: chrX:34991795-34992043 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 18

Conread position: 28-502
Cow position: chrX:24112942-24112478 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 64

Conread position: 28-525
Cow position: chrX:22130384-22129862 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 127

Conread position: 30-633
Cow position: chrX:2536587-2535965 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 196

Conread position: 31-492
Cow position: chrX:6015192-6014718 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 313
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 70

Conread position: 31-662
Cow position: chrX:10417424-10416778 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 63

Conread position: 32-738
Cow position: chrX:26427764-26427050 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 62

Conread position: 33-265
Cow position: chrX:21587415-21587647 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 153, 60

Conread position: 37-889
Cow position: chrX:13417522-13416681 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 46

Conread position: 67-664
Cow position: chrX:20697164-20696588 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 27

Conread position: 70-315
Cow position: chrX:2143659-2143899 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 17

Conread position: 71-299
Cow position: chrX:30004086-30004315 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 75

Conread position: 74-639
Cow position: chrX:40246953-40246389 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 92-266
Cow position: chrX:31726052-31726232 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 29

Conread position: 92-901
Cow position: chrX:17614047-17613261 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 102-764
Cow position: chrX:31081922-31082586 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 126

Conread position: 104-370
Cow position: chrX:29928377-29928118 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 25

Conread position: 108-537
Cow position: chrX:15874647-15874210 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 282
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 132

Conread position: 117-333
Cow position: chrX:16016710-16016488 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 123

Conread position: 118-852
Cow position: chrX:7540050-7540805 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 461
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 5

Conread position: 123-894
Cow position: chrX:5323752-5322968 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 123-903
Cow position: chrX:23070675-23071462 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 133

Conread position: 127-655
Cow position: chrX:44387099-44387626 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 142-871
Cow position: chrX:6250438-6249714 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 76

Conread position: 167-341
Cow position: chrX:24275699-24275865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 8

Conread position: 168-339
Cow position: chrX:26628002-26627839 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 5

Conread position: 168-355
Cow position: chrX:20804157-20804336 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 5

Conread position: 168-425
Cow position: chrX:28603428-28603182 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 5

Conread position: 168-477
Cow position: chrX:5299193-5298893 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 5

Conread position: 173-370
Cow position: chrX:21632553-21632362 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 13

Conread position: 173-556
Cow position: chrX:30178961-30178580 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 13

Conread position: 181-887
Cow position: chrX:22610973-22611693 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 163

Conread position: 187-901
Cow position: chrX:29285477-29286196 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 191-734
Cow position: chrX:37332239-37332794 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 352
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 15

Conread position: 194-896
Cow position: chrX:15980910-15980199 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 152

Conread position: 203-764
Cow position: chrX:31374386-31374919 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 363
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 38

Conread position: 206-903
Cow position: chrX:16699362-16700071 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 9

Conread position: 207-593
Cow position: chrX:23391538-23391149 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 43

Conread position: 207-780
Cow position: chrX:29794058-29793480 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 44

Conread position: 207-901
Cow position: chrX:29096262-29096961 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 212-360
Cow position: chrX:5283681-5283528 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 212-611
Cow position: chrX:28562156-28561753 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 131

Conread position: 215-901
Cow position: chrX:15127173-15126470 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 26

Conread position: 215-901
Cow position: chrX:26528045-26528741 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 26

Conread position: 220-396
Cow position: chrX:18954451-18954275 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 137, 21

Conread position: 220-438
Cow position: chrX:22488255-22488473 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 134, 21

Conread position: 220-512
Cow position: chrX:30183820-30183524 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 220-595
Cow position: chrX:14594837-14595217 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 123

Conread position: 220-889
Cow position: chrX:2482563-2481877 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 21

Conread position: 220-901
Cow position: chrX:23041049-23040357 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 220-901
Cow position: chrX:29853495-29852799 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 21

Conread position: 220-903
Cow position: chrX:21829598-21830297 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 221-362
Cow position: chrX:507314-507455 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 122

Conread position: 221-362
Cow position: chrX:982705-982846 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 122

Conread position: 221-362
Cow position: chrX:41410954-41410813 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 125

Conread position: 221-444
Cow position: chrX:11433768-11433992 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 122, 132

Conread position: 221-481
Cow position: chrX:8454819-8455081 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 221-629
Cow position: chrX:30055668-30055255 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 221-669
Cow position: chrX:3376041-3375591 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 221-894
Cow position: chrX:18659715-18659030 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 120

Conread position: 221-903
Cow position: chrX:16363057-16362355 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 125

Conread position: 222-342
Cow position: chrX:32467327-32467446 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 222-362
Cow position: chrX:15599005-15599144 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 19

Conread position: 222-633
Cow position: chrX:21304459-21304041 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 222-795
Cow position: chrX:21223004-21223585 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 19

Conread position: 222-894
Cow position: chrX:30232032-30231338 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 19

Conread position: 222-894
Cow position: chrX:37849083-37849757 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 222-901
Cow position: chrX:970842-971541 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 122

Conread position: 222-903
Cow position: chrX:320542-321234 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 52

Conread position: 222-903
Cow position: chrX:13413064-13412363 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 28

Conread position: 222-903
Cow position: chrX:23277095-23277795 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 223-362
Cow position: chrX:16275746-16275884 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 223-476
Cow position: chrX:12669788-12669530 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 135, 114

Conread position: 223-542
Cow position: chrX:24484337-24484017 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 126

Conread position: 223-569
Cow position: chrX:2101928-2102278 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-765
Cow position: chrX:24089471-24090019 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 27

Conread position: 223-803
Cow position: chrX:28634347-28633760 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 118

Conread position: 223-843
Cow position: chrX:21490267-21490891 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 27

Conread position: 223-889
Cow position: chrX:22619239-22618546 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 121

Conread position: 223-889
Cow position: chrX:29885059-29885739 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 22

Conread position: 223-894
Cow position: chrX:1833896-1834576 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 77

Conread position: 223-894
Cow position: chrX:21340473-21341154 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 116

Conread position: 223-901
Cow position: chrX:26758529-26757849 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 18

Conread position: 223-903
Cow position: chrX:2604117-2604816 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-903
Cow position: chrX:6873004-6872304 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 123

Conread position: 223-903
Cow position: chrX:20315986-20315293 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 100

Conread position: 223-903
Cow position: chrX:22525535-22524835 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-903
Cow position: chrX:26767122-26766441 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 108

Conread position: 224-496
Cow position: chrX:30056722-30057003 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 127

Conread position: 224-901
Cow position: chrX:23019401-23020095 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 95

Conread position: 225-903
Cow position: chrX:9008407-9009103 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 121

Conread position: 231-575
Cow position: chrX:28758566-28758207 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 117

Conread position: 231-669
Cow position: chrX:30011114-30011560 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 114

Conread position: 231-894
Cow position: chrX:31187170-31186466 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 116

Conread position: 231-903
Cow position: chrX:8479724-8480418 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 115

Conread position: 234-901
Cow position: chrX:39563851-39563170 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 110

Conread position: 235-464
Cow position: chrX:17478442-17478211 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 112

Conread position: 235-512
Cow position: chrX:12803784-12803502 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 112

Conread position: 235-595
Cow position: chrX:18219477-18219844 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-620
Cow position: chrX:13398040-13397650 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 235-669
Cow position: chrX:12280190-12279752 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 112

Conread position: 235-778
Cow position: chrX:30173591-30173033 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 235-793
Cow position: chrX:20359971-20359394 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-866
Cow position: chrX:12654680-12654032 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 112

Conread position: 235-888
Cow position: chrX:15179351-15178673 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 235-894
Cow position: chrX:12343036-12343693 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-894
Cow position: chrX:12353320-12353999 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-894
Cow position: chrX:27426240-27425568 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 235-894
Cow position: chrX:31493500-31494176 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 235-894
Cow position: chrX:35529942-35530620 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-896
Cow position: chrX:28585060-28585739 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-903
Cow position: chrX:2562777-2562090 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 235-903
Cow position: chrX:5863478-5864163 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 235-903
Cow position: chrX:13076617-13075928 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 235-903
Cow position: chrX:13097191-13096503 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 235-903
Cow position: chrX:37812242-37812931 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 239-894
Cow position: chrX:7481717-7482390 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 104

Conread position: 240-894
Cow position: chrX:31198533-31199210 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 135

Conread position: 241-408
Cow position: chrX:8670678-8670846 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 102

Conread position: 241-435
Cow position: chrX:29947794-29947989 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 102

Conread position: 241-608
Cow position: chrX:16812508-16812136 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 102

Conread position: 241-612
Cow position: chrX:7030273-7030644 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 241-744
Cow position: chrX:7093685-7094202 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 241-803
Cow position: chrX:10531471-10530896 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 241-894
Cow position: chrX:5336399-5335728 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 241-894
Cow position: chrX:7751987-7752659 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 241-901
Cow position: chrX:11464915-11464239 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 241-903
Cow position: chrX:5394914-5394241 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 182

Conread position: 241-903
Cow position: chrX:26400090-26399411 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 241-903
Cow position: chrX:32067069-32066396 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 244-362
Cow position: chrX:41404383-41404265 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 102

Conread position: 245-903
Cow position: chrX:8588269-8588932 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 262-898
Cow position: chrX:11149209-11148573 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 84

Conread position: 270-901
Cow position: chrX:21589090-21589732 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 73

Conread position: 273-903
Cow position: chrX:29911306-29910656 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 73

Conread position: 274-494
Cow position: chrX:5833311-5833090 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 71

Conread position: 274-631
Cow position: chrX:19873956-19874299 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 274-894
Cow position: chrX:21579596-21580224 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 274-903
Cow position: chrX:12288274-12287635 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 279-642
Cow position: chrX:22582601-22582244 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 52

Conread position: 280-569
Cow position: chrX:16237909-16238203 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 280-903
Cow position: chrX:20720116-20720764 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 63

Conread position: 281-903
Cow position: chrX:28553776-28554379 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 292-901
Cow position: chrX:41851055-41850433 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 54

Show alignments to all cow chromosomes.