Cow genome map


           Conread name:
           Tra1-TCH01G120013
        

               Conread position:
               458-778
               

               Cow position:
               chr18:999226-999553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               464-717
               

               Cow position:
               chr18:12238211-12238464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               471-792
               

               Cow position:
               chr18:23799421-23799759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 30
               

               Conread position:
               471-792
               

               Cow position:
               chr18:25922167-25922501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               477-788
               

               Cow position:
               chr18:34044613-34044929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 63
               

               Conread position:
               483-778
               

               Cow position:
               chr18:32840290-32840599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               139, 79
               

               Conread position:
               485-788
               

               Cow position:
               chr18:14422067-14422378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               134, 7
               

               Conread position:
               501-788
               

               Cow position:
               chr18:17743138-17742842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               624-792
               

               Cow position:
               chr18:28971257-28971090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               624-792
               

               Cow position:
               chr18:29864663-29864496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               106, 9
               
Show alignments to all cow chromosomes.