Cow genome map
| Conread name: | Tra1-TCH01H040007 |
| Conread position: | 1-178 |
| Cow position: | chr1:57970783-57970605 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 1-182 |
| Cow position: | chr1:86363278-86363462 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 1-185 |
| Cow position: | chr1:11324320-11324506 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 2-177 |
| Cow position: | chr1:56424717-56424895 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:16798291-16798109 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:29037348-29037527 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:29949009-29948834 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:53371162-53371343 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:70863840-70864024 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-178 |
| Cow position: | chr1:71794343-71794518 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 75, 55 |
| Conread position: | 2-184 |
| Cow position: | chr1:9513848-9513663 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:21677613-21677792 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 2-184 |
| Cow position: | chr1:23970002-23969817 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:28414404-28414222 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 2-184 |
| Cow position: | chr1:31597017-31597200 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 2-184 |
| Cow position: | chr1:34684304-34684489 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:51967070-51967253 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:56645072-56644890 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 2-184 |
| Cow position: | chr1:61562843-61563028 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:72036501-72036317 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 2-184 |
| Cow position: | chr1:89186634-89186449 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:92553952-92553767 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-184 |
| Cow position: | chr1:101788509-101788316 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 2-185 |
| Cow position: | chr1:42054714-42054538 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 3-178 |
| Cow position: | chr1:81301925-81302100 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 3-185 |
| Cow position: | chr1:79633745-79633559 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 12-183 |
| Cow position: | chr1:3339477-3339651 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 25-178 |
| Cow position: | chr1:22481827-22481675 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 28 |
Show alignments to all cow chromosomes.