Cow genome map
| Conread name: | Tra1-TCH01H040007 |
| Conread position: | 1-178 |
| Cow position: | chr3:48210892-48211069 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 1-187 |
| Cow position: | chr3:38496461-38496645 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 2-178 |
| Cow position: | chr3:21004499-21004678 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-178 |
| Cow position: | chr3:64697513-64697692 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 149 |
| Conread position: | 2-178 |
| Cow position: | chr3:69421778-69421602 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 2-178 |
| Cow position: | chr3:77581300-77581478 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 2-178 |
| Cow position: | chr3:81979847-81979669 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 2-184 |
| Cow position: | chr3:6896526-6896712 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-184 |
| Cow position: | chr3:10370687-10370870 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 2-184 |
| Cow position: | chr3:19718851-19718673 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 2-184 |
| Cow position: | chr3:24586548-24586360 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 2-184 |
| Cow position: | chr3:39555900-39555718 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 123 |
| Conread position: | 2-184 |
| Cow position: | chr3:50461033-50461220 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 2-184 |
| Cow position: | chr3:63689562-63689377 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-184 |
| Cow position: | chr3:70323346-70323165 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 2-184 |
| Cow position: | chr3:72389656-72389842 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-185 |
| Cow position: | chr3:36516957-36516772 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 2-191 |
| Cow position: | chr3:67545902-67545709 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-178 |
| Cow position: | chr3:57742212-57742382 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 4-178 |
| Cow position: | chr3:14467190-14467015 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 5-184 |
| Cow position: | chr3:11182261-11182078 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-184 |
| Cow position: | chr3:62794579-62794404 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 22-184 |
| Cow position: | chr3:45567914-45568080 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 141 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 31-181 |
| Cow position: | chr3:77426416-77426569 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 35-178 |
| Cow position: | chr3:2852764-2852618 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 57-184 |
| Cow position: | chr3:49253252-49253382 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 59-184 |
| Cow position: | chr3:54654440-54654312 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 61-184 |
| Cow position: | chr3:45185239-45185113 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.