Cow genome map
| Conread name: | Tra1-TCH01H040007 |
| Conread position: | 1-178 |
| Cow position: | chr5:64845669-64845493 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 2-177 |
| Cow position: | chr5:40897741-40897564 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 2-178 |
| Cow position: | chr5:12680000-12679812 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-178 |
| Cow position: | chr5:18249648-18249827 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-178 |
| Cow position: | chr5:25901872-25901698 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 2-178 |
| Cow position: | chr5:30581926-30582103 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 123 |
| Conread position: | 2-178 |
| Cow position: | chr5:30844418-30844597 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-178 |
| Cow position: | chr5:31098664-31098484 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 2-178 |
| Cow position: | chr5:40347691-40347512 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-178 |
| Cow position: | chr5:67653921-67654096 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 116 |
| Conread position: | 2-182 |
| Cow position: | chr5:2706301-2706116 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 183 |
| Conread position: | 2-184 |
| Cow position: | chr5:25929100-25928923 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-184 |
| Cow position: | chr5:28948153-28947966 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-184 |
| Cow position: | chr5:49911334-49911514 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 2-186 |
| Cow position: | chr5:31750944-31751131 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-191 |
| Cow position: | chr5:58000277-58000472 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 7-184 |
| Cow position: | chr5:26404301-26404122 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 9-184 |
| Cow position: | chr5:3440933-3441109 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 12-184 |
| Cow position: | chr5:47697596-47697420 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 15-184 |
| Cow position: | chr5:48534458-48534630 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 22-182 |
| Cow position: | chr5:41980080-41980246 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.