Cow genome map
| Conread name: | Tra1-TCH01H040007 |
| Conread position: | 1-178 |
| Cow position: | chr9:4306413-4306233 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-178 |
| Cow position: | chr9:1850957-1850778 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 2-178 |
| Cow position: | chr9:5516853-5517026 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 2-178 |
| Cow position: | chr9:10939381-10939560 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-178 |
| Cow position: | chr9:13472897-13472725 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 2-178 |
| Cow position: | chr9:17301474-17301294 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 2-184 |
| Cow position: | chr9:5534275-5534090 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-184 |
| Cow position: | chr9:11851207-11851022 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 2-184 |
| Cow position: | chr9:17870151-17870336 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-184 |
| Cow position: | chr9:36845265-36845085 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 2-185 |
| Cow position: | chr9:5525961-5525776 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 3-184 |
| Cow position: | chr9:11157701-11157520 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 6-184 |
| Cow position: | chr9:10110300-10110476 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 111 |
| Conread position: | 14-184 |
| Cow position: | chr9:28774570-28774400 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 15-184 |
| Cow position: | chr9:22438026-22438196 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 33-184 |
| Cow position: | chr9:4719235-4719388 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 37-184 |
| Cow position: | chr9:3960475-3960325 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 50-184 |
| Cow position: | chr9:52002388-52002253 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 63-178 |
| Cow position: | chr9:28004469-28004587 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 182-374 |
| Cow position: | chr9:52690363-52690162 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 365-753 |
| Cow position: | chr9:52690201-52689808 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 727-885 |
| Cow position: | chr9:52689135-52688972 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.