Cow genome map
| Conread name: | Tra1-TCH01H040007 |
| Conread position: | 2-177 |
| Cow position: | chrX:9260915-9261093 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-178 |
| Cow position: | chrX:360094-360274 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-178 |
| Cow position: | chrX:2382031-2382211 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 2-178 |
| Cow position: | chrX:10867284-10867106 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-178 |
| Cow position: | chrX:21627860-21627683 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 2-178 |
| Cow position: | chrX:28648316-28648137 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-178 |
| Cow position: | chrX:29791238-29791064 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 104 |
| Conread position: | 2-179 |
| Cow position: | chrX:41847968-41847788 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-183 |
| Cow position: | chrX:37487513-37487696 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 2-184 |
| Cow position: | chrX:13282033-13282218 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 2-184 |
| Cow position: | chrX:21591859-21592043 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 2-184 |
| Cow position: | chrX:26623237-26623055 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 2-185 |
| Cow position: | chrX:15142594-15142409 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 2-185 |
| Cow position: | chrX:24175380-24175195 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 141 |
| Conread position: | 4-178 |
| Cow position: | chrX:41880554-41880377 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-184 |
| Cow position: | chrX:11074578-11074403 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 12-178 |
| Cow position: | chrX:11458243-11458070 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 17-184 |
| Cow position: | chrX:20800369-20800539 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 41-178 |
| Cow position: | chrX:28879973-28879832 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.