Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 8-479
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 139

Conread position: 14-417
Cow position:
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 260

Conread position: 16-350
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 22

Conread position: 21-336
Cow position:
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 96

Conread position: 21-351
Cow position:
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 122

Conread position: 23-325
Cow position:
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 253

Conread position: 23-335
Cow position:
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 154

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-350
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 99

Conread position: 23-351
Cow position:
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-372
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-372
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 201

Conread position: 23-373
Cow position:
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 23-389
Cow position:
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-445
Cow position:
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 252

Conread position: 23-614
Cow position:
Alignm length: 610
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 36

Conread position: 24-373
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 24-630
Cow position:
Alignm length: 613
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 252

Conread position: 25-407
Cow position:
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 118

Conread position: 25-414
Cow position:
Alignm length: 408
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 81

Conread position: 26-337
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 28

Conread position: 26-338
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 106, 19

Conread position: 26-356
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 149

Conread position: 26-372
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 87

Conread position: 26-410
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 27

Conread position: 26-414
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 361

Conread position: 26-431
Cow position:
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 119

Conread position: 26-508
Cow position:
Alignm length: 493
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 58

Conread position: 26-732
Cow position:
Alignm length: 715
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 85

Conread position: 26-770
Cow position:
Alignm length: 749
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 57

Conread position: 27-351
Cow position:
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 250

Conread position: 27-352
Cow position:
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 248

Conread position: 27-353
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 249

Conread position: 27-371
Cow position:
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 93

Conread position: 27-371
Cow position:
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 252

Conread position: 27-371
Cow position:
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 27-389
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 27-482
Cow position:
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 28-351
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 248

Conread position: 30-325
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 30-329
Cow position:
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 30-331
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 156

Conread position: 30-331
Cow position:
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-336
Cow position:
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-340
Cow position:
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 162

Conread position: 30-340
Cow position:
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 166

Conread position: 30-341
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 84

Conread position: 30-341
Cow position:
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 30-350
Cow position:
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 137

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 113

Conread position: 30-351
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 114

Conread position: 30-351
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 25

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 74

Conread position: 30-372
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 30-372
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 60

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 181

Conread position: 30-430
Cow position:
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 25

Conread position: 30-511
Cow position:
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 37-351
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 28, 84

Conread position: 37-352
Cow position:
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 17

Conread position: 37-371
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 177

Conread position: 38-773
Cow position:
Alignm length: 749
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 57

Conread position: 39-284
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 39-581
Cow position:
Alignm length: 560
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 78

Conread position: 40-340
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 41-417
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 33

Conread position: 41-417
Cow position:
Alignm length: 382
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 92

Conread position: 42-336
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 42-341
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 233

Conread position: 42-341
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 149

Conread position: 42-372
Cow position:
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 233

Conread position: 44-341
Cow position:
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 44-350
Cow position:
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 44-351
Cow position:
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 127

Conread position: 45-336
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 121

Conread position: 45-340
Cow position:
Alignm length: 299
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 230

Conread position: 45-340
Cow position:
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 236

Conread position: 45-341
Cow position:
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 230

Conread position: 45-351
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 123

Conread position: 45-351
Cow position:
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 230

Conread position: 45-375
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 82

Conread position: 45-435
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 142

Conread position: 45-630
Cow position:
Alignm length: 595
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 45-769
Cow position:
Alignm length: 736
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 46-351
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 169

Conread position: 51-336
Cow position:
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 224

Conread position: 51-773
Cow position:
Alignm length: 737
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 60-350
Cow position:
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 113

Conread position: 61-336
Cow position:
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 213

Conread position: 69-386
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 14

Conread position: 78-336
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 196

Conread position: 90-772
Cow position:
Alignm length: 698
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 66

Conread position: 95-351
Cow position:
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 180

Conread position: 96-765
Cow position:
Alignm length: 680
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 98-417
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 99, 179

Conread position: 110-373
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 89

Conread position: 142-417
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 32, 59

Conread position: 151-372
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 123

Conread position: 151-442
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 123

Conread position: 155-341
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 129, 119

Conread position: 171-434
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 175-374
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 188-414
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 85

Conread position: 191-393
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 82

Conread position: 199-340
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 85, 75

Conread position: 217-337
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 65, 56

Conread position: 221-351
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 53

Conread position: 254-774
Cow position:
Alignm length: 540
Alignm identity: 353
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 88, 36

Conread position: 276-478
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 277-772
Cow position:
Alignm length: 507
Alignm identity: 326
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 99, 60

Conread position: 282-630
Cow position:
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 43

Conread position: 299-764
Cow position:
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 16

Conread position: 333-652
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 146, 116

Conread position: 335-764
Cow position:
Alignm length: 446
Alignm identity: 288
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 217

Conread position: 362-732
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 207

Conread position: 407-612
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 414-769
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 35

Conread position: 528-751
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 161, 50

Conread position: 616-771
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 148

Show alignments to all cow chromosomes.