Cow genome map
| Conread name: | Tra1-TCH01H040051 |
| Conread position: | 8-479 |
| Cow position: | chr1:67901956-67901477 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 139 |
| Conread position: | 14-417 |
| Cow position: | chr1:31366100-31365703 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 260 |
| Conread position: | 16-350 |
| Cow position: | chr1:100597393-100597060 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 21-336 |
| Cow position: | chr1:11292120-11291806 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 21-351 |
| Cow position: | chr1:21999972-21999643 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 122 |
| Conread position: | 23-325 |
| Cow position: | chr1:55276500-55276196 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 253 |
| Conread position: | 23-335 |
| Cow position: | chr1:56489826-56490139 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-336 |
| Cow position: | chr1:13450194-13450506 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 154 |
| Conread position: | 23-336 |
| Cow position: | chr1:82564489-82564803 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-350 |
| Cow position: | chr1:17012752-17012422 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 23-351 |
| Cow position: | chr1:8554314-8554646 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-352 |
| Cow position: | chr1:18880407-18880074 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 23-352 |
| Cow position: | chr1:28710902-28711235 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-352 |
| Cow position: | chr1:29362282-29362615 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-352 |
| Cow position: | chr1:31396676-31397009 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-372 |
| Cow position: | chr1:20828875-20829230 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-372 |
| Cow position: | chr1:56723141-56723495 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 201 |
| Conread position: | 23-373 |
| Cow position: | chr1:57656532-57656880 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 23-389 |
| Cow position: | chr1:61308988-61309360 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-445 |
| Cow position: | chr1:69766448-69766871 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 252 |
| Conread position: | 23-614 |
| Cow position: | chr1:89479305-89479890 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 24-373 |
| Cow position: | chr1:33712049-33712400 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 24-630 |
| Cow position: | chr1:72136625-72137223 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 252 |
| Conread position: | 25-407 |
| Cow position: | chr1:34689328-34689711 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 118 |
| Conread position: | 25-414 |
| Cow position: | chr1:36919894-36920296 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 26-337 |
| Cow position: | chr1:18014201-18013887 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 26-338 |
| Cow position: | chr1:99374956-99375253 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 26-356 |
| Cow position: | chr1:52918631-52918309 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 26-372 |
| Cow position: | chr1:72656970-72657324 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 26-410 |
| Cow position: | chr1:69060510-69060868 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 26-414 |
| Cow position: | chr1:28801431-28801021 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 361 |
| Conread position: | 26-431 |
| Cow position: | chr1:54365835-54365438 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 119 |
| Conread position: | 26-508 |
| Cow position: | chr1:32342086-32341604 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 26-732 |
| Cow position: | chr1:31330799-31330110 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 85 |
| Conread position: | 26-770 |
| Cow position: | chr1:88270607-88269898 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 27-351 |
| Cow position: | chr1:57567939-57568266 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 250 |
| Conread position: | 27-352 |
| Cow position: | chr1:62925602-62925932 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 248 |
| Conread position: | 27-353 |
| Cow position: | chr1:21087402-21087734 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 249 |
| Conread position: | 27-371 |
| Cow position: | chr1:39543760-39544103 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 27-371 |
| Cow position: | chr1:71562589-71562239 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 252 |
| Conread position: | 27-371 |
| Cow position: | chr1:85791676-85792020 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 27-389 |
| Cow position: | chr1:33851267-33851626 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 27-482 |
| Cow position: | chr1:59210150-59209687 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 28-351 |
| Cow position: | chr1:93854510-93854835 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 248 |
| Conread position: | 30-325 |
| Cow position: | chr1:12062204-12061908 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 30-329 |
| Cow position: | chr1:63605789-63605489 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 30-331 |
| Cow position: | chr1:33550911-33551212 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 156 |
| Conread position: | 30-331 |
| Cow position: | chr1:79335812-79335510 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-336 |
| Cow position: | chr1:76752661-76752354 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-340 |
| Cow position: | chr1:38414793-38415101 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 162 |
| Conread position: | 30-340 |
| Cow position: | chr1:82918669-82918361 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 166 |
| Conread position: | 30-341 |
| Cow position: | chr1:58335829-58336139 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 84 |
| Conread position: | 30-341 |
| Cow position: | chr1:72981260-72981571 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 78 |
| Conread position: | 30-350 |
| Cow position: | chr1:102435046-102434726 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 137 |
| Conread position: | 30-351 |
| Cow position: | chr1:52359283-52358963 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 113 |
| Conread position: | 30-351 |
| Cow position: | chr1:56144345-56144024 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 30-351 |
| Cow position: | chr1:57367140-57366818 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 30-351 |
| Cow position: | chr1:68607551-68607229 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr1:79456975-79456658 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 30-372 |
| Cow position: | chr1:25180038-25179695 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 30-372 |
| Cow position: | chr1:49974198-49973855 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-373 |
| Cow position: | chr1:18406200-18405861 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 30-373 |
| Cow position: | chr1:28722865-28723210 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 30-373 |
| Cow position: | chr1:52233119-52232779 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 30-373 |
| Cow position: | chr1:82924185-82923843 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 30-373 |
| Cow position: | chr1:88635364-88635707 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 181 |
| Conread position: | 30-430 |
| Cow position: | chr1:55323062-55322665 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 30-511 |
| Cow position: | chr1:13880128-13880587 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 37-351 |
| Cow position: | chr1:97123816-97124122 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 37-352 |
| Cow position: | chr1:99349036-99348719 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 37-371 |
| Cow position: | chr1:97226706-97226371 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 177 |
| Conread position: | 38-773 |
| Cow position: | chr1:25887164-25886447 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 39-284 |
| Cow position: | chr1:33895681-33895927 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 39-581 |
| Cow position: | chr1:59933542-59934083 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 40-340 |
| Cow position: | chr1:40684688-40684387 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 41-417 |
| Cow position: | chr1:78289870-78290245 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 41-417 |
| Cow position: | chr1:97056111-97055742 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 42-336 |
| Cow position: | chr1:17036553-17036257 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 42-341 |
| Cow position: | chr1:76622953-76622653 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 233 |
| Conread position: | 42-341 |
| Cow position: | chr1:80359174-80358876 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 149 |
| Conread position: | 42-372 |
| Cow position: | chr1:58884063-58883732 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 233 |
| Conread position: | 44-341 |
| Cow position: | chr1:28873077-28873378 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 234 |
| Conread position: | 44-350 |
| Cow position: | chr1:42736456-42736765 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 234 |
| Conread position: | 44-351 |
| Cow position: | chr1:69402992-69403294 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 127 |
| Conread position: | 45-336 |
| Cow position: | chr1:76545531-76545240 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 45-340 |
| Cow position: | chr1:18244378-18244081 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 230 |
| Conread position: | 45-340 |
| Cow position: | chr1:42290395-42290686 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 236 |
| Conread position: | 45-341 |
| Cow position: | chr1:62244640-62244343 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 230 |
| Conread position: | 45-351 |
| Cow position: | chr1:85882011-85882316 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 45-351 |
| Cow position: | chr1:88130778-88131085 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 230 |
| Conread position: | 45-375 |
| Cow position: | chr1:85780770-85780441 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 82 |
| Conread position: | 45-435 |
| Cow position: | chr1:72080780-72081182 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 142 |
| Conread position: | 45-630 |
| Cow position: | chr1:102556065-102556630 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 45-769 |
| Cow position: | chr1:82355732-82356426 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 46-351 |
| Cow position: | chr1:91893110-91892809 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 169 |
| Conread position: | 51-336 |
| Cow position: | chr1:56193918-56193632 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 224 |
| Conread position: | 51-773 |
| Cow position: | chr1:30027533-30026817 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 149 |
| Conread position: | 60-350 |
| Cow position: | chr1:94659709-94659995 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 113 |
| Conread position: | 61-336 |
| Cow position: | chr1:82913120-82912844 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 213 |
| Conread position: | 69-386 |
| Cow position: | chr1:80556035-80555734 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 78-336 |
| Cow position: | chr1:95239410-95239669 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 196 |
| Conread position: | 90-772 |
| Cow position: | chr1:78360795-78361465 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 95-351 |
| Cow position: | chr1:5501991-5502248 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 96-765 |
| Cow position: | chr1:5318805-5319464 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 98-417 |
| Cow position: | chr1:98661250-98660936 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 99, 179 |
| Conread position: | 110-373 |
| Cow position: | chr1:17941710-17941451 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 142-417 |
| Cow position: | chr1:24650862-24651136 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 151-372 |
| Cow position: | chr1:69922324-69922103 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 133, 123 |
| Conread position: | 151-442 |
| Cow position: | chr1:40513264-40512977 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 123 |
| Conread position: | 155-341 |
| Cow position: | chr1:65386446-65386632 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 129, 119 |
| Conread position: | 171-434 |
| Cow position: | chr1:94253052-94253315 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 103 |
| Conread position: | 175-374 |
| Cow position: | chr1:21720027-21720226 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-414 |
| Cow position: | chr1:42870091-42869871 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 191-393 |
| Cow position: | chr1:72039194-72038993 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 82 |
| Conread position: | 199-340 |
| Cow position: | chr1:87516121-87515980 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 217-337 |
| Cow position: | chr1:5355307-5355427 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 221-351 |
| Cow position: | chr1:30534840-30534710 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 254-774 |
| Cow position: | chr1:86609630-86610154 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 353 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 276-478 |
| Cow position: | chr1:45021958-45021757 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 277-772 |
| Cow position: | chr1:30058759-30059240 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 326 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 282-630 |
| Cow position: | chr1:58179898-58179554 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 43 |
| Conread position: | 299-764 |
| Cow position: | chr1:31418696-31418227 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 333-652 |
| Cow position: | chr1:29414311-29413986 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 146, 116 |
| Conread position: | 335-764 |
| Cow position: | chr1:84149873-84150311 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 217 |
| Conread position: | 362-732 |
| Cow position: | chr1:23051372-23051742 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 207 |
| Conread position: | 407-612 |
| Cow position: | chr1:69061077-69061275 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 414-769 |
| Cow position: | chr1:77112049-77111699 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 528-751 |
| Cow position: | chr1:40512972-40512752 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 616-771 |
| Cow position: | chr1:29413984-29413829 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 148 |
Show alignments to all cow chromosomes.