Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               15-386
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               19-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               26-446
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               26-450
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 190
               

               Conread position:
               26-472
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               26-482
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               26-488
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               26-528
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               26-529
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 22
               

               Conread position:
               26-543
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               26-544
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 249
               

               Conread position:
               26-566
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               26-773
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 260
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 248
               

               Conread position:
               27-372
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 247
               

               Conread position:
               30-331
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 113
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 126
               

               Conread position:
               30-339
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-350
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 169
               

               Conread position:
               30-350
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 236
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 246
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 245
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 113
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               30-400
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               213, 67
               

               Conread position:
               37-414
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 47
               

               Conread position:
               40-351
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               40-371
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               41-336
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 235
               

               Conread position:
               41-340
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 234
               

               Conread position:
               41-341
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 203
               

               Conread position:
               41-371
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 235
               

               Conread position:
               42-336
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               42-372
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 233
               

               Conread position:
               42-426
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               44-351
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 236
               

               Conread position:
               45-327
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 98
               

               Conread position:
               45-341
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               45-382
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 18
               

               Conread position:
               45-485
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               45-490
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               46-336
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               67, 247
               

               Conread position:
               51-352
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 139
               

               Conread position:
               52-764
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 214
               

               Conread position:
               64-340
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 122
               

               Conread position:
               79-614
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               99-367
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 126
               

               Conread position:
               122-442
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 152
               

               Conread position:
               129-442
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 56
               

               Conread position:
               129-498
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               156, 125
               

               Conread position:
               136-352
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               147-772
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 127
               

               Conread position:
               177-595
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 21
               

               Conread position:
               205-452
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               233-340
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-566
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               101, 162
               

               Conread position:
               256-764
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               265-629
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               287-442
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 31
               

               Conread position:
               307-620
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               172, 37
               

               Conread position:
               425-771
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               478-773
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               533-761
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 19
               
Show alignments to all cow chromosomes.