Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 19-447
Cow position: chr11:87127486-87127913 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 20-442
Cow position: chr11:8282721-8283142 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 65

Conread position: 22-373
Cow position: chr11:37492003-37491648 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 22-527
Cow position: chr11:3240295-3240788 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 8

Conread position: 23-325
Cow position: chr11:28230101-28229803 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 60

Conread position: 23-336
Cow position: chr11:28063332-28063637 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 23-336
Cow position: chr11:32450515-32450828 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 157

Conread position: 23-351
Cow position: chr11:36744533-36744201 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position: chr11:5343570-5343237 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position: chr11:20921098-20920765 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position: chr11:57628399-57628066 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-371
Cow position: chr11:15983271-15983619 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-417
Cow position: chr11:54209266-54209660 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 23-442
Cow position: chr11:10089981-10090409 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 133

Conread position: 24-351
Cow position: chr11:23876954-23877278 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 97

Conread position: 26-574
Cow position: chr11:33044470-33043921 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 26-630
Cow position: chr11:42428985-42429591 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 27-336
Cow position: chr11:67846918-67846610 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 27-341
Cow position: chr11:37477469-37477153 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 247

Conread position: 27-352
Cow position: chr11:17108035-17107705 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 27-372
Cow position: chr11:8887502-8887159 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 28-772
Cow position: chr11:29234001-29233290 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 40

Conread position: 29-331
Cow position: chr11:28054946-28054644 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 127

Conread position: 30-335
Cow position: chr11:7113250-7113554 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 77

Conread position: 30-340
Cow position: chr11:12351415-12351100 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 249

Conread position: 30-340
Cow position: chr11:66726120-66726440 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 30-341
Cow position: chr11:19102832-19102520 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-350
Cow position: chr11:29668974-29668656 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 220

Conread position: 30-351
Cow position: chr11:4271215-4270885 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 30-351
Cow position: chr11:10847099-10847418 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 192

Conread position: 30-351
Cow position: chr11:71329298-71329620 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-373
Cow position: chr11:4027900-4027565 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 129

Conread position: 30-461
Cow position: chr11:17220567-17220142 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 251

Conread position: 30-466
Cow position: chr11:4041417-4040977 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 150

Conread position: 37-373
Cow position: chr11:8244368-8244702 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 144

Conread position: 37-389
Cow position: chr11:37065462-37065098 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 41

Conread position: 38-326
Cow position: chr11:77728865-77728569 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 40-316
Cow position: chr11:9157761-9157492 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 116

Conread position: 41-352
Cow position: chr11:61401389-61401071 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 236

Conread position: 42-371
Cow position: chr11:53287788-53287461 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 18

Conread position: 42-372
Cow position: chr11:67450164-67450500 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 159

Conread position: 44-337
Cow position: chr11:31414254-31413971 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 45-350
Cow position: chr11:24392988-24393292 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 60

Conread position: 45-351
Cow position: chr11:41171023-41170716 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 230

Conread position: 46-372
Cow position: chr11:85394140-85393814 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 38

Conread position: 51-350
Cow position: chr11:26125256-26124956 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 224

Conread position: 51-351
Cow position: chr11:11987782-11988083 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 131

Conread position: 57-334
Cow position: chr11:48084794-48085069 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 142

Conread position: 60-330
Cow position: chr11:12358741-12358470 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 215

Conread position: 77-331
Cow position: chr11:52886796-52886547 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 113

Conread position: 79-381
Cow position: chr11:34020591-34020895 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 198

Conread position: 84-372
Cow position: chr11:25527268-25527557 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 101-352
Cow position: chr11:38505878-38505625 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 14

Conread position: 138-392
Cow position: chr11:4065471-4065212 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 144-338
Cow position: chr11:38132368-38132173 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 126

Conread position: 147-336
Cow position: chr11:12093329-12093519 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 138, 126

Conread position: 155-351
Cow position: chr11:53432286-53432090 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 119

Conread position: 159-340
Cow position: chr11:9220336-9220155 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 115

Conread position: 252-757
Cow position: chr11:10050589-10051080 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 274-628
Cow position: chr11:81852510-81852141 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 133

Conread position: 299-537
Cow position: chr11:43732922-43733161 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 97

Conread position: 322-602
Cow position: chr11:65161466-65161185 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 22

Conread position: 339-770
Cow position: chr11:39801983-39802416 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 440-772
Cow position: chr11:17180209-17180523 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 47, 40

Conread position: 440-773
Cow position: chr11:87128437-87128761 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 41

Show alignments to all cow chromosomes.