Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-750
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               478
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               154, 82
               

               Conread position:
               20-619
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               395
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               23-351
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 252
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 252
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 170
               

               Conread position:
               23-442
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 34
               

               Conread position:
               26-339
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 248
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               27-341
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               27-422
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 111
               

               Conread position:
               29-461
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 246
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-352
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 151
               

               Conread position:
               30-373
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 247
               

               Conread position:
               30-430
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               31-322
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 243
               

               Conread position:
               40-598
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               42-372
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 163
               

               Conread position:
               44-409
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               60, 188
               

               Conread position:
               45-337
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               45-382
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 104
               

               Conread position:
               45-750
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 111
               

               Conread position:
               51-351
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 208
               

               Conread position:
               60-341
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 215
               

               Conread position:
               60-372
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 96
               

               Conread position:
               65-374
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               73-341
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 202
               

               Conread position:
               74-350
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               137-336
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               145, 136
               

               Conread position:
               139-352
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               99, 135
               

               Conread position:
               175-336
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               182-774
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 64
               

               Conread position:
               184-336
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               218-442
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 55
               

               Conread position:
               245-527
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               264-529
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               369-769
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               378-598
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               478-731
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 95
               

               Conread position:
               526-773
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               626-772
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               132, 66
               
Show alignments to all cow chromosomes.