Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               13-750
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               16-634
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 252
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-345
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               23-350
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-430
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               26-457
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 31
               

               Conread position:
               26-502
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 28
               

               Conread position:
               27-372
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               27-373
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 120
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 231
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 245
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 246
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 251
               

               Conread position:
               30-373
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 100
               

               Conread position:
               30-374
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               30-375
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-714
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 118
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               223, 27
               

               Conread position:
               37-351
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 148
               

               Conread position:
               37-372
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 86
               

               Conread position:
               38-350
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               40-373
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               40-380
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 252
               

               Conread position:
               44-331
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 233
               

               Conread position:
               44-372
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 234
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 230
               

               Conread position:
               45-566
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               46-417
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 241
               

               Conread position:
               62-765
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 73
               

               Conread position:
               71-296
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 203
               

               Conread position:
               150-375
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 124
               

               Conread position:
               161-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               185-442
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               215-405
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               281-528
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               110, 200
               

               Conread position:
               436-711
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 197
               

               Conread position:
               490-702
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               494-771
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 150
               
Show alignments to all cow chromosomes.