Cow genome map
Conread name: | Tra1-TCH01H040051 |
Conread position: | 16-337 |
Cow position: | chr19:439619-439309 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 115 |
Conread position: | 23-309 |
Cow position: | chr19:39688562-39688847 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 82 |
Conread position: | 23-336 |
Cow position: | chr19:37929-38242 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 133 |
Conread position: | 23-352 |
Cow position: | chr19:43143749-43144082 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 251 |
Conread position: | 23-372 |
Cow position: | chr19:170709-170359 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 45 |
Conread position: | 25-595 |
Cow position: | chr19:30755211-30755766 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 136 |
Conread position: | 26-331 |
Cow position: | chr19:28581620-28581317 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 82 |
Conread position: | 27-371 |
Cow position: | chr19:7342104-7342452 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 248 |
Conread position: | 29-474 |
Cow position: | chr19:15953893-15954316 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 30-336 |
Cow position: | chr19:10672266-10671959 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 245 |
Conread position: | 30-351 |
Cow position: | chr19:204001-204323 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 30-351 |
Cow position: | chr19:4385521-4385831 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 114 |
Conread position: | 30-351 |
Cow position: | chr19:33873467-33873788 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 31 |
Conread position: | 30-351 |
Cow position: | chr19:33941652-33941972 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 113 |
Conread position: | 40-352 |
Cow position: | chr19:772649-772964 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 234 |
Conread position: | 40-353 |
Cow position: | chr19:687115-687430 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 194 |
Conread position: | 42-331 |
Cow position: | chr19:172263-172553 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 42-336 |
Cow position: | chr19:52151779-52151483 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 233 |
Conread position: | 42-352 |
Cow position: | chr19:32212018-32211707 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 55 |
Conread position: | 44-329 |
Cow position: | chr19:2274327-2274038 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 234 |
Conread position: | 45-331 |
Cow position: | chr19:40852383-40852096 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 230 |
Conread position: | 45-340 |
Cow position: | chr19:1032132-1032426 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 39 |
Conread position: | 45-372 |
Cow position: | chr19:7488368-7488696 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 136 |
Conread position: | 45-401 |
Cow position: | chr19:6553660-6554006 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 18 |
Conread position: | 46-365 |
Cow position: | chr19:893557-893238 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 97 |
Conread position: | 48-714 |
Cow position: | chr19:537068-537699 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 13 |
Conread position: | 60-351 |
Cow position: | chr19:39390578-39390870 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 215 |
Conread position: | 62-407 |
Cow position: | chr19:352920-352573 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 6 |
Conread position: | 78-446 |
Cow position: | chr19:680528-680161 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 155, 33 |
Conread position: | 79-341 |
Cow position: | chr19:76179-75917 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 195 |
Conread position: | 97-478 |
Cow position: | chr19:42649005-42648631 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 177 |
Conread position: | 137-351 |
Cow position: | chr19:28376631-28376848 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 140 |
Conread position: | 149-340 |
Cow position: | chr19:29209759-29209948 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 135, 50 |
Conread position: | 162-351 |
Cow position: | chr19:5729001-5729191 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 149 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 163-372 |
Cow position: | chr19:40817529-40817320 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 123, 111 |
Conread position: | 183-381 |
Cow position: | chr19:341416-341614 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 101, 8 |
Conread position: | 201-452 |
Cow position: | chr19:42897-43147 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 214, 0 |
Conread position: | 204-548 |
Cow position: | chr19:27037736-27037378 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 243 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 82, 61 |
Conread position: | 214-416 |
Cow position: | chr19:27052623-27052424 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 157 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 70, 59 |
Conread position: | 272-442 |
Cow position: | chr19:137072-136909 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 298-580 |
Cow position: | chr19:20126095-20126372 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 202 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 179, 45 |
Conread position: | 307-761 |
Cow position: | chr19:44225019-44224579 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 301 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 135, 78 |
Conread position: | 437-764 |
Cow position: | chr19:6554241-6554567 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 243 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 43, 153 |
Conread position: | 492-634 |
Cow position: | chr19:42648399-42648255 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 43, 114 |
Conread position: | 528-761 |
Cow position: | chr19:136902-136672 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 177, 56 |
Conread position: | 528-761 |
Cow position: | chr19:3138052-3138286 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 102, 50 |
Conread position: | 528-768 |
Cow position: | chr19:44532572-44532816 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 165 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 158, 56 |
Show alignments to all cow chromosomes.