Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 16-337
Cow position: chr19:439619-439309 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 115

Conread position: 23-309
Cow position: chr19:39688562-39688847 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 82

Conread position: 23-336
Cow position: chr19:37929-38242 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 133

Conread position: 23-352
Cow position: chr19:43143749-43144082 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-372
Cow position: chr19:170709-170359 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 45

Conread position: 25-595
Cow position: chr19:30755211-30755766 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 136

Conread position: 26-331
Cow position: chr19:28581620-28581317 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 82

Conread position: 27-371
Cow position: chr19:7342104-7342452 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 29-474
Cow position: chr19:15953893-15954316 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 30-336
Cow position: chr19:10672266-10671959 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position: chr19:204001-204323 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 30-351
Cow position: chr19:4385521-4385831 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 114

Conread position: 30-351
Cow position: chr19:33873467-33873788 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 30-351
Cow position: chr19:33941652-33941972 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 113

Conread position: 40-352
Cow position: chr19:772649-772964 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 40-353
Cow position: chr19:687115-687430 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 194

Conread position: 42-331
Cow position: chr19:172263-172553 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 42-336
Cow position: chr19:52151779-52151483 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 233

Conread position: 42-352
Cow position: chr19:32212018-32211707 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 44-329
Cow position: chr19:2274327-2274038 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 45-331
Cow position: chr19:40852383-40852096 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 230

Conread position: 45-340
Cow position: chr19:1032132-1032426 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 39

Conread position: 45-372
Cow position: chr19:7488368-7488696 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 45-401
Cow position: chr19:6553660-6554006 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 46-365
Cow position: chr19:893557-893238 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 97

Conread position: 48-714
Cow position: chr19:537068-537699 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 13

Conread position: 60-351
Cow position: chr19:39390578-39390870 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 215

Conread position: 62-407
Cow position: chr19:352920-352573 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 6

Conread position: 78-446
Cow position: chr19:680528-680161 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 155, 33

Conread position: 79-341
Cow position: chr19:76179-75917 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 97-478
Cow position: chr19:42649005-42648631 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 177

Conread position: 137-351
Cow position: chr19:28376631-28376848 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 140

Conread position: 149-340
Cow position: chr19:29209759-29209948 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 50

Conread position: 162-351
Cow position: chr19:5729001-5729191 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 163-372
Cow position: chr19:40817529-40817320 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 111

Conread position: 183-381
Cow position: chr19:341416-341614 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 8

Conread position: 201-452
Cow position: chr19:42897-43147 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 214, 0

Conread position: 204-548
Cow position: chr19:27037736-27037378 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 82, 61

Conread position: 214-416
Cow position: chr19:27052623-27052424 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 59

Conread position: 272-442
Cow position: chr19:137072-136909 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 298-580
Cow position: chr19:20126095-20126372 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 179, 45

Conread position: 307-761
Cow position: chr19:44225019-44224579 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 135, 78

Conread position: 437-764
Cow position: chr19:6554241-6554567 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 43, 153

Conread position: 492-634
Cow position: chr19:42648399-42648255 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 114

Conread position: 528-761
Cow position: chr19:136902-136672 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 177, 56

Conread position: 528-761
Cow position: chr19:3138052-3138286 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 50

Conread position: 528-768
Cow position: chr19:44532572-44532816 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 158, 56

Show alignments to all cow chromosomes.