Cow genome map
| Conread name: | Tra1-TCH01H040051 |
| Conread position: | 14-351 |
| Cow position: | chr20:29948480-29948817 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 168 |
| Conread position: | 14-352 |
| Cow position: | chr20:25961084-25961426 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 259 |
| Conread position: | 23-372 |
| Cow position: | chr20:19437939-19438284 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 168 |
| Conread position: | 23-374 |
| Cow position: | chr20:3270694-3271045 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 241 |
| Conread position: | 26-654 |
| Cow position: | chr20:31378891-31378269 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 27-336 |
| Cow position: | chr20:822760-823071 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 27-351 |
| Cow position: | chr20:7116476-7116151 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 249 |
| Conread position: | 27-351 |
| Cow position: | chr20:27869190-27869516 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 249 |
| Conread position: | 30-336 |
| Cow position: | chr20:13762899-13763208 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 247 |
| Conread position: | 30-336 |
| Cow position: | chr20:15947396-15947076 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 216 |
| Conread position: | 30-341 |
| Cow position: | chr20:21914323-21914636 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 247 |
| Conread position: | 30-347 |
| Cow position: | chr20:23469662-23469351 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 184 |
| Conread position: | 30-350 |
| Cow position: | chr20:28565599-28565278 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr20:5534935-5535256 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 30-351 |
| Cow position: | chr20:12438764-12438442 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-402 |
| Cow position: | chr20:9953988-9953619 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 167 |
| Conread position: | 30-434 |
| Cow position: | chr20:18315587-18315212 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 122, 77 |
| Conread position: | 40-338 |
| Cow position: | chr20:13680050-13679752 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 116 |
| Conread position: | 40-338 |
| Cow position: | chr20:15064776-15065070 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 5 |
| Conread position: | 44-351 |
| Cow position: | chr20:28160784-28161089 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 45-372 |
| Cow position: | chr20:25850979-25850651 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 45-417 |
| Cow position: | chr20:2791339-2790958 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 45-773 |
| Cow position: | chr20:22206554-22207264 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 55-351 |
| Cow position: | chr20:15292032-15292329 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 220 |
| Conread position: | 55-769 |
| Cow position: | chr20:8993622-8992904 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 96-733 |
| Cow position: | chr20:13434887-13434255 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 98-469 |
| Cow position: | chr20:10856967-10856598 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 138-336 |
| Cow position: | chr20:10846011-10845818 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 192-381 |
| Cow position: | chr20:21393749-21393946 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 205-616 |
| Cow position: | chr20:5465431-5465819 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 221-336 |
| Cow position: | chr20:19495172-19495287 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 52 |
Show alignments to all cow chromosomes.