Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               9-503
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               14-336
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 260
               

               Conread position:
               14-550
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 197
               

               Conread position:
               20-352
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 254
               

               Conread position:
               20-352
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 254
               

               Conread position:
               23-307
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 210
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 259
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 68
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-372
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 252
               

               Conread position:
               23-373
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 252
               

               Conread position:
               23-440
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               23-442
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 85
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               27-373
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               29-417
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 8
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 213
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 114
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 152
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               30-478
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 228
               

               Conread position:
               37-370
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               40-336
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               40-371
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 244
               

               Conread position:
               40-442
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               42-371
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               44-372
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               45-338
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               240, 38
               

               Conread position:
               45-340
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 229
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               36, 138
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 230
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 137
               

               Conread position:
               45-422
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 203
               

               Conread position:
               51-336
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               62-408
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               74-527
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               114-351
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               166-426
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 42
               

               Conread position:
               175-351
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               197-752
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               353
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               206-340
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               292-764
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               319
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               379-773
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               428-774
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 6
               

               Conread position:
               497-772
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               528-773
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.