Cow genome map
| Conread name: | Tra1-TCH01H040051 |
| Conread position: | 3-426 |
| Cow position: | chr22:6503762-6503338 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 7-430 |
| Cow position: | chr22:3306813-3306389 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 54 |
| Conread position: | 14-304 |
| Cow position: | chr22:46635779-46635496 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 119, 101 |
| Conread position: | 16-417 |
| Cow position: | chr22:309706-310103 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 260 |
| Conread position: | 16-630 |
| Cow position: | chr22:7277453-7278068 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 23-336 |
| Cow position: | chr22:6020598-6020912 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-352 |
| Cow position: | chr22:20240905-20240573 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 245 |
| Conread position: | 23-357 |
| Cow position: | chr22:10546581-10546919 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-386 |
| Cow position: | chr22:27283980-27284335 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 135 |
| Conread position: | 26-365 |
| Cow position: | chr22:44475195-44475513 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 26-478 |
| Cow position: | chr22:1048350-1048797 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 38 |
| Conread position: | 26-765 |
| Cow position: | chr22:298393-297673 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 468 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 27-336 |
| Cow position: | chr22:5233366-5233055 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 27-336 |
| Cow position: | chr22:10909899-10909583 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 27-371 |
| Cow position: | chr22:27309834-27309489 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 27-373 |
| Cow position: | chr22:42771414-42771742 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 27-396 |
| Cow position: | chr22:41419755-41419385 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 27-414 |
| Cow position: | chr22:44609539-44609920 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 29-520 |
| Cow position: | chr22:9273381-9273872 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 30-340 |
| Cow position: | chr22:157959-157652 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 48 |
| Conread position: | 30-340 |
| Cow position: | chr22:1319340-1319651 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 30-340 |
| Cow position: | chr22:5672680-5672991 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 30-340 |
| Cow position: | chr22:46853285-46853596 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 30-350 |
| Cow position: | chr22:17328796-17328475 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr22:560762-560440 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 183 |
| Conread position: | 30-351 |
| Cow position: | chr22:19143756-19143434 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 245 |
| Conread position: | 30-351 |
| Cow position: | chr22:31335090-31334773 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 146 |
| Conread position: | 30-351 |
| Cow position: | chr22:36861587-36861265 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr22:44933923-44934244 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 30-372 |
| Cow position: | chr22:693569-693914 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 244 |
| Conread position: | 30-372 |
| Cow position: | chr22:36736706-36737045 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 117 |
| Conread position: | 30-373 |
| Cow position: | chr22:36533796-36533454 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 30-422 |
| Cow position: | chr22:44353013-44352629 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 31-430 |
| Cow position: | chr22:8136257-8135865 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 31-442 |
| Cow position: | chr22:11030904-11031316 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 243 |
| Conread position: | 34-336 |
| Cow position: | chr22:46547717-46547414 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 37-324 |
| Cow position: | chr22:18816435-18816147 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 238 |
| Conread position: | 37-331 |
| Cow position: | chr22:36183709-36184001 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 37-383 |
| Cow position: | chr22:1270575-1270238 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 40-413 |
| Cow position: | chr22:327206-326843 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 150 |
| Conread position: | 40-417 |
| Cow position: | chr22:15851283-15851651 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 88, 157 |
| Conread position: | 41-340 |
| Cow position: | chr22:16200425-16200728 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 236 |
| Conread position: | 41-381 |
| Cow position: | chr22:525741-525397 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 44-341 |
| Cow position: | chr22:15314000-15313697 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 44-350 |
| Cow position: | chr22:39469569-39469259 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 234 |
| Conread position: | 45-352 |
| Cow position: | chr22:44489845-44490155 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 230 |
| Conread position: | 45-632 |
| Cow position: | chr22:870906-870310 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 51-331 |
| Cow position: | chr22:21589289-21589569 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 68-307 |
| Cow position: | chr22:8740904-8740686 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 93-389 |
| Cow position: | chr22:117836-117536 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 182 |
| Conread position: | 116-430 |
| Cow position: | chr22:1283621-1283314 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 158 |
| Conread position: | 122-371 |
| Cow position: | chr22:18027315-18027563 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 132-434 |
| Cow position: | chr22:23853378-23853677 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 152, 64 |
| Conread position: | 173-336 |
| Cow position: | chr22:37266059-37266223 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 281-520 |
| Cow position: | chr22:36275520-36275755 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 379-765 |
| Cow position: | chr22:11782280-11781900 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 528-772 |
| Cow position: | chr22:1283297-1283057 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 182, 51 |
| Conread position: | 533-760 |
| Cow position: | chr22:23853695-23853918 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 581-755 |
| Cow position: | chr22:44609990-44610161 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 46 |
Show alignments to all cow chromosomes.