Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               14-351
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               15-325
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 263
               

               Conread position:
               17-567
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 184
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               23-351
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               23-371
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 253
               

               Conread position:
               23-373
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               23-442
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               27-351
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 244
               

               Conread position:
               27-351
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 158
               

               Conread position:
               30-291
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 244
               

               Conread position:
               30-331
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 152
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-375
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 113
               

               Conread position:
               30-401
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               30-417
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 135
               

               Conread position:
               37-331
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 237
               

               Conread position:
               40-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 235
               

               Conread position:
               40-372
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               42-352
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               44-417
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 235
               

               Conread position:
               46-351
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 229
               

               Conread position:
               52-389
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 219
               

               Conread position:
               55-351
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 52
               

               Conread position:
               55-372
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 150
               

               Conread position:
               75-773
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 209
               

               Conread position:
               79-422
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 50
               

               Conread position:
               107-565
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               117-341
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               119-594
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               136-373
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-566
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               343, 60
               

               Conread position:
               201-595
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               248-452
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               298-595
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               181, 221
               

               Conread position:
               361-653
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               163, 29
               

               Conread position:
               370-630
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               578-765
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 51
               
Show alignments to all cow chromosomes.