Cow genome map
| Conread name: | Tra1-TCH01H040051 |
| Conread position: | 14-351 |
| Cow position: | chr23:14965819-14965487 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 15-325 |
| Cow position: | chr23:20156290-20155976 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 263 |
| Conread position: | 17-567 |
| Cow position: | chr23:19332478-19331923 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 23-336 |
| Cow position: | chr23:4359766-4360080 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-336 |
| Cow position: | chr23:19950647-19950333 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 23-336 |
| Cow position: | chr23:20302151-20302462 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 74 |
| Conread position: | 23-351 |
| Cow position: | chr23:2027184-2026854 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 23-371 |
| Cow position: | chr23:16616913-16616555 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 253 |
| Conread position: | 23-373 |
| Cow position: | chr23:2313301-2312948 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 76 |
| Conread position: | 23-442 |
| Cow position: | chr23:1327526-1327118 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 102 |
| Conread position: | 27-351 |
| Cow position: | chr23:27399443-27399768 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 27-351 |
| Cow position: | chr23:30636362-30636036 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 30-291 |
| Cow position: | chr23:3013589-3013851 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 244 |
| Conread position: | 30-331 |
| Cow position: | chr23:15525553-15525855 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-336 |
| Cow position: | chr23:25684111-25683814 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 30-341 |
| Cow position: | chr23:967402-967095 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 152 |
| Conread position: | 30-351 |
| Cow position: | chr23:5779143-5778822 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 30-351 |
| Cow position: | chr23:36031430-36031107 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-375 |
| Cow position: | chr23:2716333-2716679 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 113 |
| Conread position: | 30-401 |
| Cow position: | chr23:29474613-29474247 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 30-417 |
| Cow position: | chr23:15177018-15177408 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 135 |
| Conread position: | 37-331 |
| Cow position: | chr23:22147300-22147009 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 237 |
| Conread position: | 40-326 |
| Cow position: | chr23:31595284-31594996 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 235 |
| Conread position: | 40-372 |
| Cow position: | chr23:2574489-2574821 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 42-352 |
| Cow position: | chr23:28217246-28217559 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 44-417 |
| Cow position: | chr23:15219938-15219563 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 235 |
| Conread position: | 46-351 |
| Cow position: | chr23:4640665-4640359 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 229 |
| Conread position: | 52-389 |
| Cow position: | chr23:4434425-4434758 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 219 |
| Conread position: | 55-351 |
| Cow position: | chr23:3881732-3881440 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 55-372 |
| Cow position: | chr23:4888643-4888959 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 150 |
| Conread position: | 75-773 |
| Cow position: | chr23:38578262-38578946 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 209 |
| Conread position: | 79-422 |
| Cow position: | chr23:8980318-8979988 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 50 |
| Conread position: | 107-565 |
| Cow position: | chr23:16615975-16615514 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 117-341 |
| Cow position: | chr23:4510107-4510332 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 119-594 |
| Cow position: | chr23:4752026-4752493 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 136-373 |
| Cow position: | chr23:2765403-2765166 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-566 |
| Cow position: | chr23:22875623-22875197 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 60 |
| Conread position: | 201-595 |
| Cow position: | chr23:31650795-31650404 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 248-452 |
| Cow position: | chr23:1402719-1402518 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 298-595 |
| Cow position: | chr23:2340902-2341203 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 181, 221 |
| Conread position: | 361-653 |
| Cow position: | chr23:16481292-16481002 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 163, 29 |
| Conread position: | 370-630 |
| Cow position: | chr23:2031835-2032089 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 578-765 |
| Cow position: | chr23:16615353-16615175 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 51 |
Show alignments to all cow chromosomes.