Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               343
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               16-324
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 151
               

               Conread position:
               21-351
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 201
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-373
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 133
               

               Conread position:
               23-422
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-629
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               26-324
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 140
               

               Conread position:
               26-351
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               26-414
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 117
               

               Conread position:
               26-756
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 14
               

               Conread position:
               27-371
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 247
               

               Conread position:
               29-338
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               254, 11
               

               Conread position:
               29-338
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               254, 11
               

               Conread position:
               29-478
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 254
               

               Conread position:
               29-489
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               30-331
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 181
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 151
               

               Conread position:
               30-350
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 33
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 99
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 154
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 151
               

               Conread position:
               30-373
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               30-373
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               37-352
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 140
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               41-374
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 235
               

               Conread position:
               41-544
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               42-372
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 232
               

               Conread position:
               43-336
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 166
               

               Conread position:
               44-336
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               44-351
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 97
               

               Conread position:
               44-355
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               45-331
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 210
               

               Conread position:
               45-350
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 239
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               45-389
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 164
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 230
               

               Conread position:
               60-351
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 215
               

               Conread position:
               64-276
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 122
               

               Conread position:
               79-756
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               471
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 198
               

               Conread position:
               152-352
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               162-605
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               208-447
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               215-434
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               221-336
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               281-529
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               440-608
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               5, 42
               

               Conread position:
               476-773
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 73
               
Show alignments to all cow chromosomes.