Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 1-341
Cow position:
Alignm length: 345
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 198

Conread position: 14-335
Cow position:
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 87

Conread position: 14-352
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 43

Conread position: 15-341
Cow position:
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 145

Conread position: 18-772
Cow position:
Alignm length: 771
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 46

Conread position: 21-441
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 70

Conread position: 23-304
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 259

Conread position: 23-326
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 23-331
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 98

Conread position: 23-336
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-350
Cow position:
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 252

Conread position: 23-350
Cow position:
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 157

Conread position: 23-351
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 158

Conread position: 23-352
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 138

Conread position: 23-367
Cow position:
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-373
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 23-442
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 23-442
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 259

Conread position: 26-351
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 203

Conread position: 26-351
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 19

Conread position: 26-425
Cow position:
Alignm length: 403
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 57

Conread position: 26-479
Cow position:
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 26-524
Cow position:
Alignm length: 511
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 59

Conread position: 26-565
Cow position:
Alignm length: 550
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 26-605
Cow position:
Alignm length: 592
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 250

Conread position: 26-614
Cow position:
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 27

Conread position: 26-630
Cow position:
Alignm length: 612
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 127

Conread position: 26-706
Cow position:
Alignm length: 693
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 37

Conread position: 27-334
Cow position:
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 248

Conread position: 27-336
Cow position:
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 27-371
Cow position:
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 27-372
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 142

Conread position: 27-428
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 234

Conread position: 27-434
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 29-381
Cow position:
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 246

Conread position: 29-529
Cow position:
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 153

Conread position: 29-772
Cow position:
Alignm length: 765
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 118

Conread position: 30-328
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 117

Conread position: 30-331
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-336
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 14

Conread position: 30-340
Cow position:
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 245

Conread position: 30-340
Cow position:
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 246

Conread position: 30-350
Cow position:
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 246

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position:
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 138

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 78

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-372
Cow position:
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 113

Conread position: 30-373
Cow position:
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 64

Conread position: 30-380
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 30

Conread position: 30-386
Cow position:
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 30-417
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 69

Conread position: 30-442
Cow position:
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 85

Conread position: 30-442
Cow position:
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 123

Conread position: 30-631
Cow position:
Alignm length: 612
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 246

Conread position: 31-571
Cow position:
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 125

Conread position: 37-336
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 37-352
Cow position:
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 37-422
Cow position:
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 40-340
Cow position:
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 235

Conread position: 40-407
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 29

Conread position: 40-442
Cow position:
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 33

Conread position: 40-548
Cow position:
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 23

Conread position: 43-352
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 44-351
Cow position:
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 45-324
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 45-340
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 45-341
Cow position:
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 231

Conread position: 45-350
Cow position:
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 230

Conread position: 45-372
Cow position:
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 230

Conread position: 45-478
Cow position:
Alignm length: 449
Alignm identity: 304
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 81

Conread position: 45-529
Cow position:
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 45-529
Cow position:
Alignm length: 493
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 45-753
Cow position:
Alignm length: 721
Alignm identity: 458
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 90, 63

Conread position: 51-331
Cow position:
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 224

Conread position: 51-331
Cow position:
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 223

Conread position: 51-337
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 51-352
Cow position:
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 57

Conread position: 51-371
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 223

Conread position: 57-415
Cow position:
Alignm length: 360
Alignm identity: 231
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 323, 11

Conread position: 57-443
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 75, 86

Conread position: 60-336
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 60-352
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 158

Conread position: 64-411
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 128

Conread position: 67-772
Cow position:
Alignm length: 713
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 7

Conread position: 90-760
Cow position:
Alignm length: 682
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 99-350
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 175

Conread position: 120-331
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 139

Conread position: 162-402
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 165-402
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 45

Conread position: 177-372
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 96

Conread position: 182-442
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 92

Conread position: 247-465
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 79

Conread position: 258-771
Cow position:
Alignm length: 548
Alignm identity: 356
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 26, 16

Conread position: 298-482
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 47

Conread position: 350-771
Cow position:
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 218

Conread position: 399-647
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 60

Conread position: 486-772
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 17

Conread position: 489-759
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 99

Conread position: 496-731
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 82

Conread position: 528-765
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 153, 46

Show alignments to all cow chromosomes.