Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               14-308
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 90
               

               Conread position:
               14-352
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 77
               

               Conread position:
               16-697
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               16-771
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               20-351
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 257
               

               Conread position:
               21-334
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               21-351
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 135
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 252
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 166
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 257
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               23-340
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 55
               

               Conread position:
               23-341
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               23-350
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 160
               

               Conread position:
               23-351
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 252
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-372
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 251
               

               Conread position:
               25-470
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               25-772
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 29
               

               Conread position:
               26-170
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               106, 130
               

               Conread position:
               26-350
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 249
               

               Conread position:
               26-414
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               26-570
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               27-351
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               27-371
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 248
               

               Conread position:
               27-373
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 156
               

               Conread position:
               27-773
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               29-524
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 248
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 244
               

               Conread position:
               30-340
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-372
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-381
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               30-442
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 357
               

               Conread position:
               30-482
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-773
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 55
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 246
               

               Conread position:
               39-372
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 145
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               42-372
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               42-372
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 232
               

               Conread position:
               44-775
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               45-337
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 200
               

               Conread position:
               45-350
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               45-372
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 236
               

               Conread position:
               45-571
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               45-590
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               45-764
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               46-351
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               50-373
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               51-765
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               52-350
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 223
               

               Conread position:
               73-541
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 201
               

               Conread position:
               96-618
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 184
               

               Conread position:
               97-482
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 32
               

               Conread position:
               111-304
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               111-373
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               118-352
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               164, 61
               

               Conread position:
               173-389
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               109, 90
               

               Conread position:
               175-478
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               185-773
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 87
               

               Conread position:
               187-573
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               187-773
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               191-450
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               190, 83
               

               Conread position:
               201-732
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               337
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               221-340
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               223-417
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               257-619
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               257-774
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               340
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 143
               

               Conread position:
               379-770
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               455-764
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               528-771
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 49
               
Show alignments to all cow chromosomes.