Cow genome map


           Conread name:
           Tra1-TCH01H040051
        

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 103
               

               Conread position:
               13-351
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               15-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               16-336
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               23-331
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               110, 64
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 206
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 160
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 251
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 255
               

               Conread position:
               23-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 116
               

               Conread position:
               23-374
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               23-422
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 133
               

               Conread position:
               23-442
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 148
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               26-407
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               26-417
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 58
               

               Conread position:
               26-707
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 250
               

               Conread position:
               26-746
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               26-753
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 44
               

               Conread position:
               26-764
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               27-271
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               27-331
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 157
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 248
               

               Conread position:
               27-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 248
               

               Conread position:
               27-350
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 249
               

               Conread position:
               27-351
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 249
               

               Conread position:
               27-352
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               27-380
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 256
               

               Conread position:
               27-390
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 165
               

               Conread position:
               27-417
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 248
               

               Conread position:
               28-371
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 115
               

               Conread position:
               29-605
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 34
               

               Conread position:
               30-325
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               30-347
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               30-350
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 245
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 246
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 145
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 142
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               30-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 81
               

               Conread position:
               30-373
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 159
               

               Conread position:
               30-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               40-514
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 116
               

               Conread position:
               41-336
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 207
               

               Conread position:
               44-331
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               44-331
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               44-350
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               44-350
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               44-351
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 233
               

               Conread position:
               44-352
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 233
               

               Conread position:
               44-691
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               416
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               45-324
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 230
               

               Conread position:
               45-351
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 63
               

               Conread position:
               45-353
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 222
               

               Conread position:
               45-365
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               45-373
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 230
               

               Conread position:
               45-773
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               470
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               339, 72
               

               Conread position:
               46-640
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 222
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               74-434
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               138-374
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               171-430
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               207-381
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               210-529
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               214-422
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               221-373
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 52
               

               Conread position:
               253-626
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               227, 21
               

               Conread position:
               307-529
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               172, 83
               

               Conread position:
               409-773
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 70
               

               Conread position:
               523-775
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               234, 54
               

               Conread position:
               524-769
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               183, 60
               

               Conread position:
               578-774
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 127
               
Show alignments to all cow chromosomes.