Cow genome map
| Conread name: | Tra1-TCH01H040051 |
| Conread position: | 7-351 |
| Cow position: | chr8:32319386-32319038 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 271 |
| Conread position: | 15-349 |
| Cow position: | chr8:12449122-12449457 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 20-336 |
| Cow position: | chr8:2885934-2886247 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 20-623 |
| Cow position: | chr8:25542681-25543292 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 256 |
| Conread position: | 23-336 |
| Cow position: | chr8:8556965-8556652 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 23-336 |
| Cow position: | chr8:26005418-26005100 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 198 |
| Conread position: | 23-352 |
| Cow position: | chr8:6065586-6065253 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 251 |
| Conread position: | 23-404 |
| Cow position: | chr8:8656033-8655644 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 24-411 |
| Cow position: | chr8:46633216-46632830 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 25-351 |
| Cow position: | chr8:25522588-25522910 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 26-340 |
| Cow position: | chr8:23216933-23217260 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 260 |
| Conread position: | 26-351 |
| Cow position: | chr8:25776488-25776162 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 249 |
| Conread position: | 26-370 |
| Cow position: | chr8:45316939-45316596 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 26-372 |
| Cow position: | chr8:44244389-44244041 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 250 |
| Conread position: | 26-506 |
| Cow position: | chr8:23766213-23765734 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 228 |
| Conread position: | 27-336 |
| Cow position: | chr8:9735432-9735743 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 27-352 |
| Cow position: | chr8:8518395-8518067 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 27-352 |
| Cow position: | chr8:27578593-27578917 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 30-331 |
| Cow position: | chr8:38390557-38390859 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-340 |
| Cow position: | chr8:45189285-45189584 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 30-341 |
| Cow position: | chr8:11831887-11832201 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 247 |
| Conread position: | 30-341 |
| Cow position: | chr8:49214616-49214928 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-342 |
| Cow position: | chr8:4686582-4686895 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-350 |
| Cow position: | chr8:5016370-5016691 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-350 |
| Cow position: | chr8:24916148-24915827 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr8:23770824-23771146 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-351 |
| Cow position: | chr8:39196026-39195706 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 234 |
| Conread position: | 30-351 |
| Cow position: | chr8:42484118-42484423 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 256, 55 |
| Conread position: | 30-372 |
| Cow position: | chr8:10743441-10743098 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-372 |
| Cow position: | chr8:17311206-17311552 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 30-373 |
| Cow position: | chr8:44036588-44036245 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 154 |
| Conread position: | 30-375 |
| Cow position: | chr8:3784899-3785245 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 30-417 |
| Cow position: | chr8:11970381-11970023 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 25 |
| Conread position: | 30-419 |
| Cow position: | chr8:47662137-47661740 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 246 |
| Conread position: | 30-426 |
| Cow position: | chr8:61035176-61034775 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 30-452 |
| Cow position: | chr8:45161177-45160763 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 30-466 |
| Cow position: | chr8:22572105-22571663 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 30-638 |
| Cow position: | chr8:45693437-45692817 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 113 |
| Conread position: | 31-442 |
| Cow position: | chr8:24420337-24419937 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 37-331 |
| Cow position: | chr8:2171183-2170888 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 238 |
| Conread position: | 37-468 |
| Cow position: | chr8:21158620-21158184 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 39-331 |
| Cow position: | chr8:8229583-8229290 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 236 |
| Conread position: | 40-417 |
| Cow position: | chr8:44693488-44693857 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 42-336 |
| Cow position: | chr8:32631824-32631531 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 155 |
| Conread position: | 42-371 |
| Cow position: | chr8:1349043-1348704 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 42-422 |
| Cow position: | chr8:1319245-1319634 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 233 |
| Conread position: | 43-769 |
| Cow position: | chr8:11056069-11056817 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 12 |
| Conread position: | 44-301 |
| Cow position: | chr8:11801432-11801695 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 45-309 |
| Cow position: | chr8:61067041-61066777 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 45-331 |
| Cow position: | chr8:14591707-14591411 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 239 |
| Conread position: | 45-336 |
| Cow position: | chr8:45448647-45448953 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 45-351 |
| Cow position: | chr8:36636338-36636033 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 136 |
| Conread position: | 45-351 |
| Cow position: | chr8:50288947-50288640 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 230 |
| Conread position: | 45-351 |
| Cow position: | chr8:59262689-59262382 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 136 |
| Conread position: | 45-401 |
| Cow position: | chr8:42161522-42161176 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 45-417 |
| Cow position: | chr8:13808800-13809178 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 224 |
| Conread position: | 45-442 |
| Cow position: | chr8:38607320-38606926 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 204 |
| Conread position: | 45-470 |
| Cow position: | chr8:46222128-46221706 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 300 |
| Conread position: | 45-478 |
| Cow position: | chr8:47491628-47491192 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 231 |
| Conread position: | 45-565 |
| Cow position: | chr8:12543831-12543327 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 46-337 |
| Cow position: | chr8:15687950-15687662 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 53-336 |
| Cow position: | chr8:10748587-10748871 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 221 |
| Conread position: | 64-326 |
| Cow position: | chr8:42759167-42759430 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 122 |
| Conread position: | 68-773 |
| Cow position: | chr8:42467552-42468254 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 206 |
| Conread position: | 73-352 |
| Cow position: | chr8:9275244-9275526 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 79-405 |
| Cow position: | chr8:33430159-33430492 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 199 |
| Conread position: | 128-340 |
| Cow position: | chr8:46600584-46600794 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 131-411 |
| Cow position: | chr8:48784485-48784770 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 135-372 |
| Cow position: | chr8:51668002-51667763 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 136-352 |
| Cow position: | chr8:34347975-34348193 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 146, 86 |
| Conread position: | 138-547 |
| Cow position: | chr8:47672770-47673187 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 44 |
| Conread position: | 176-387 |
| Cow position: | chr8:30488167-30487958 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 193-340 |
| Cow position: | chr8:42420212-42420064 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 205-411 |
| Cow position: | chr8:44076522-44076322 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 272-529 |
| Cow position: | chr8:12717034-12717293 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 361-750 |
| Cow position: | chr8:55438499-55438142 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 126, 145 |
| Conread position: | 377-653 |
| Cow position: | chr8:44106036-44106315 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 174 |
| Conread position: | 465-771 |
| Cow position: | chr8:16083882-16084190 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 484-774 |
| Cow position: | chr8:24419975-24419683 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 528-761 |
| Cow position: | chr8:44693887-44694106 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 533-760 |
| Cow position: | chr8:38606916-38606697 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 45 |
| Conread position: | 578-772 |
| Cow position: | chr8:44106279-44106470 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 28 |
Show alignments to all cow chromosomes.