Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 10-323
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 54

Conread position: 10-432
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 19

Conread position: 13-350
Cow position:
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 17

Conread position: 13-411
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 14-373
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 14-654
Cow position:
Alignm length: 657
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 130

Conread position: 17-350
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 259

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 250

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 178

Conread position: 23-386
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 171, 29

Conread position: 23-389
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 64

Conread position: 24-333
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 69

Conread position: 26-326
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 28

Conread position: 26-374
Cow position:
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 120

Conread position: 26-402
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 66

Conread position: 26-491
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 260, 91

Conread position: 27-336
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 256

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 248

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 27-340
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 27-352
Cow position:
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 149

Conread position: 27-373
Cow position:
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 27-407
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 301

Conread position: 27-418
Cow position:
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 28-773
Cow position:
Alignm length: 762
Alignm identity: 482
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 88, 26

Conread position: 29-760
Cow position:
Alignm length: 748
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 30-307
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 246

Conread position: 30-331
Cow position:
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 182

Conread position: 30-331
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-349
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 256

Conread position: 30-350
Cow position:
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 247

Conread position: 30-350
Cow position:
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 30-350
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 30-351
Cow position:
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 246

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 141

Conread position: 30-351
Cow position:
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 30-351
Cow position:
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 246

Conread position: 30-372
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 30

Conread position: 30-373
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 257

Conread position: 30-422
Cow position:
Alignm length: 396
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 30-613
Cow position:
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 30-646
Cow position:
Alignm length: 626
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 33

Conread position: 30-771
Cow position:
Alignm length: 761
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 26

Conread position: 37-336
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 140

Conread position: 37-351
Cow position:
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 218

Conread position: 40-351
Cow position:
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 182

Conread position: 41-341
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 41-433
Cow position:
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 43-276
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 17

Conread position: 44-340
Cow position:
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 233

Conread position: 44-372
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 235

Conread position: 45-351
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 210

Conread position: 45-372
Cow position:
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 45-375
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 224

Conread position: 45-460
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 223

Conread position: 45-590
Cow position:
Alignm length: 568
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 243

Conread position: 45-625
Cow position:
Alignm length: 589
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 10

Conread position: 60-350
Cow position:
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 215

Conread position: 60-768
Cow position:
Alignm length: 724
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 102

Conread position: 93-581
Cow position:
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 58

Conread position: 102-372
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 105-384
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 38

Conread position: 112-625
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 143-351
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 141, 131

Conread position: 143-445
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 130

Conread position: 151-679
Cow position:
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 123

Conread position: 163-352
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 110

Conread position: 164-351
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 165-423
Cow position:
Alignm length: 264
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 111

Conread position: 172-351
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 112, 11

Conread position: 172-711
Cow position:
Alignm length: 553
Alignm identity: 345
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 82

Conread position: 175-372
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 98

Conread position: 186-331
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 88

Conread position: 201-417
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 76

Conread position: 211-477
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 75, 62

Conread position: 261-756
Cow position:
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 300-528
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 35

Conread position: 312-741
Cow position:
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 7

Conread position: 313-527
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 15

Conread position: 333-536
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 358-521
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 32

Conread position: 370-527
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 395-772
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 190

Conread position: 478-771
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 24

Conread position: 528-772
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 209, 56

Conread position: 547-765
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 160, 31

Show alignments to all cow chromosomes.