Cow genome map

Conread name: Tra1-TCH01H040051

Conread position: 14-271
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 142

Conread position: 14-352
Cow position:
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 14-352
Cow position:
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 14-352
Cow position:
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 260

Conread position: 14-478
Cow position:
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 15-352
Cow position:
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 29

Conread position: 20-351
Cow position:
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 20-373
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 253

Conread position: 21-349
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 255

Conread position: 23-300
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 39

Conread position: 23-326
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 88

Conread position: 23-336
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 153

Conread position: 23-336
Cow position:
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-336
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 23-340
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 253

Conread position: 23-341
Cow position:
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-350
Cow position:
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 157

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-352
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 253

Conread position: 23-352
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 254

Conread position: 23-352
Cow position:
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-371
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-372
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-372
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 23-372
Cow position:
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 251

Conread position: 23-373
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 23-381
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 253

Conread position: 26-381
Cow position:
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 22

Conread position: 26-574
Cow position:
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 26-614
Cow position:
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 26-629
Cow position:
Alignm length: 613
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 82

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 249

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 176

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 27-336
Cow position:
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 27-352
Cow position:
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 247

Conread position: 27-352
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 178

Conread position: 27-371
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 27-373
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 27-630
Cow position:
Alignm length: 616
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 36

Conread position: 28-482
Cow position:
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 246

Conread position: 29-330
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 246

Conread position: 29-772
Cow position:
Alignm length: 773
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 30-331
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 225

Conread position: 30-335
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 30-336
Cow position:
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-336
Cow position:
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-336
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 30-340
Cow position:
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 60

Conread position: 30-350
Cow position:
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-351
Cow position:
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 30-372
Cow position:
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 30-372
Cow position:
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 74

Conread position: 30-373
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 246

Conread position: 30-381
Cow position:
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 244

Conread position: 30-420
Cow position:
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 41

Conread position: 30-422
Cow position:
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 151

Conread position: 30-770
Cow position:
Alignm length: 752
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 54

Conread position: 31-337
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 267

Conread position: 31-351
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 37-307
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 238

Conread position: 37-309
Cow position:
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 237

Conread position: 37-373
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 37-380
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 12

Conread position: 37-411
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 37-413
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 20

Conread position: 40-336
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 40-372
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 103

Conread position: 41-372
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 234

Conread position: 42-336
Cow position:
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 168

Conread position: 44-341
Cow position:
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 45-337
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 16

Conread position: 45-426
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 131

Conread position: 45-567
Cow position:
Alignm length: 532
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 28

Conread position: 45-618
Cow position:
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 46-351
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 229

Conread position: 46-351
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 229

Conread position: 49-745
Cow position:
Alignm length: 726
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 97

Conread position: 50-441
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 120

Conread position: 51-351
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 20

Conread position: 52-341
Cow position:
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 222

Conread position: 55-639
Cow position:
Alignm length: 600
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 60-351
Cow position:
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 215

Conread position: 70-326
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 204

Conread position: 70-442
Cow position:
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 204

Conread position: 70-511
Cow position:
Alignm length: 451
Alignm identity: 295
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 27

Conread position: 79-352
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 164

Conread position: 95-373
Cow position:
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 159

Conread position: 95-599
Cow position:
Alignm length: 516
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 159

Conread position: 98-411
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 179

Conread position: 106-336
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 176, 28

Conread position: 106-373
Cow position:
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 169

Conread position: 114-352
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 161

Conread position: 121-372
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 154

Conread position: 122-332
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 153

Conread position: 122-574
Cow position:
Alignm length: 461
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 125-442
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 8, 18

Conread position: 126-525
Cow position:
Alignm length: 415
Alignm identity: 259
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 128

Conread position: 150-330
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 134, 124

Conread position: 164-310
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 109

Conread position: 168-373
Cow position:
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 106

Conread position: 170-772
Cow position:
Alignm length: 627
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 127

Conread position: 171-349
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 113, 83

Conread position: 172-390
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 110, 101

Conread position: 175-341
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 98

Conread position: 191-350
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 91, 82

Conread position: 198-340
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 86, 76

Conread position: 208-430
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 65

Conread position: 230-422
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 43

Conread position: 249-627
Cow position:
Alignm length: 386
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 88

Conread position: 308-630
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 171, 110

Conread position: 379-771
Cow position:
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 102

Conread position: 425-773
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 86

Conread position: 651-773
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.