Cow genome map


           Conread name:
           Tra1-TCH01H050011
        

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 150
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 171
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 156
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               148, 154
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               147, 155
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               149, 158
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               92, 87
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               248, 244
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               149, 164
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               151, 166
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 164
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               150, 166
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 156
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               226, 246
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               149, 143
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 153
               

               Conread position:
               2-278
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 145
               

               Conread position:
               2-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               149, 156
               

               Conread position:
               2-283
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               239, 224
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 147
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               3-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               81, 75
               

               Conread position:
               7-280
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               224, 215
               

               Conread position:
               7-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               10-221
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-224
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               10-224
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               10-224
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               10-225
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-225
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 145
               

               Conread position:
               10-225
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-264
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               10-278
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-278
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               138, 145
               

               Conread position:
               10-278
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 148
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               168, 164
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               225, 240
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               141, 149
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               255, 0
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-280
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               147, 141
               

               Conread position:
               10-281
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               232, 223
               

               Conread position:
               10-281
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               10-281
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 157
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               214, 235
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 144
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               167, 159
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               241, 236
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               240, 225
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               231, 207
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-284
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               149, 141
               

               Conread position:
               10-292
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               221, 241
               

               Conread position:
               10-313
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               272, 0
               

               Conread position:
               12-283
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               222, 231
               

               Conread position:
               13-228
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-280
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-278
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               27-280
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 131
               

               Conread position:
               49-284
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-278
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.