Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 3-126 |
| Cow position: | chr11:5648839-5648716 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 3-137 |
| Cow position: | chr11:19606412-19606277 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 3-178 |
| Cow position: | chr11:31422831-31422654 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 3-192 |
| Cow position: | chr11:1668766-1668574 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 3-192 |
| Cow position: | chr11:9874413-9874217 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 3-192 |
| Cow position: | chr11:52832621-52832819 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 3-193 |
| Cow position: | chr11:67174807-67174618 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 3-200 |
| Cow position: | chr11:38794632-38794436 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 3-202 |
| Cow position: | chr11:14941510-14941702 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 3-202 |
| Cow position: | chr11:47193614-47193408 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 4-132 |
| Cow position: | chr11:52402563-52402427 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 5-188 |
| Cow position: | chr11:24243891-24243695 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 5-192 |
| Cow position: | chr11:41272236-41272033 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-192 |
| Cow position: | chr11:67871505-67871707 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-196 |
| Cow position: | chr11:69402153-69402357 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 5-197 |
| Cow position: | chr11:65444749-65444953 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 5-202 |
| Cow position: | chr11:63433961-63434168 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-178 |
| Cow position: | chr11:9056055-9055870 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 6-192 |
| Cow position: | chr11:20491665-20491469 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-192 |
| Cow position: | chr11:42519830-42519637 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 6-192 |
| Cow position: | chr11:47565840-47566042 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 6-196 |
| Cow position: | chr11:696251-696453 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 6-196 |
| Cow position: | chr11:11752419-11752624 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 7-190 |
| Cow position: | chr11:50951651-50951454 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 8-188 |
| Cow position: | chr11:54133991-54134170 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 8-189 |
| Cow position: | chr11:26468242-26468047 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 8-190 |
| Cow position: | chr11:45890054-45889864 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 8-190 |
| Cow position: | chr11:62573912-62574106 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 8-191 |
| Cow position: | chr11:47168921-47169106 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 8-192 |
| Cow position: | chr11:36701845-36701651 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 8-196 |
| Cow position: | chr11:14308734-14308530 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 9-192 |
| Cow position: | chr11:18144722-18144919 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 192 |
| Conread position: | 11-191 |
| Cow position: | chr11:4609755-4609934 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 29-196 |
| Cow position: | chr11:16261955-16262134 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 35-204 |
| Cow position: | chr11:65826687-65826858 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 35-211 |
| Cow position: | chr11:49153012-49152829 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 35-224 |
| Cow position: | chr11:71492798-71492991 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 36-190 |
| Cow position: | chr11:63156855-63157009 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 36-192 |
| Cow position: | chr11:25331683-25331842 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 36-193 |
| Cow position: | chr11:68423125-68422969 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 45-196 |
| Cow position: | chr11:80521003-80520853 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 47-196 |
| Cow position: | chr11:33348135-33348290 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.