Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 1-226 |
| Cow position: | chr13:12206914-12207149 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 3-125 |
| Cow position: | chr13:8822733-8822859 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-192 |
| Cow position: | chr13:12745540-12745744 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-196 |
| Cow position: | chr13:1958875-1959084 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-196 |
| Cow position: | chr13:8245464-8245262 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 105 |
| Conread position: | 3-196 |
| Cow position: | chr13:9664928-9665135 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-196 |
| Cow position: | chr13:20466418-20466211 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-196 |
| Cow position: | chr13:33281873-33282079 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-196 |
| Cow position: | chr13:34995462-34995252 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 195 |
| Conread position: | 3-196 |
| Cow position: | chr13:49200503-49200710 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 3-201 |
| Cow position: | chr13:21628013-21627802 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 3-224 |
| Cow position: | chr13:20839434-20839667 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 4-224 |
| Cow position: | chr13:51940602-51940840 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 5-192 |
| Cow position: | chr13:1558644-1558456 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 5-192 |
| Cow position: | chr13:25435254-25435050 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-196 |
| Cow position: | chr13:13446282-13446086 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-196 |
| Cow position: | chr13:13578165-13577960 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 171 |
| Conread position: | 5-196 |
| Cow position: | chr13:26523068-26522874 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 5-196 |
| Cow position: | chr13:54094679-54094887 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-183 |
| Cow position: | chr13:661766-661581 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 6-187 |
| Cow position: | chr13:3016303-3016114 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 6-192 |
| Cow position: | chr13:12521908-12521717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 6-192 |
| Cow position: | chr13:18550875-18551062 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 6-192 |
| Cow position: | chr13:22075541-22075742 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-192 |
| Cow position: | chr13:33955155-33954960 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-192 |
| Cow position: | chr13:54470887-54471081 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 6-196 |
| Cow position: | chr13:33975301-33975489 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 6-219 |
| Cow position: | chr13:9083138-9082913 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 7-190 |
| Cow position: | chr13:17346681-17346872 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 7-190 |
| Cow position: | chr13:60651034-60650835 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 7-196 |
| Cow position: | chr13:32717992-32717800 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 8-186 |
| Cow position: | chr13:32167438-32167250 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 8-192 |
| Cow position: | chr13:20180288-20180485 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 10-196 |
| Cow position: | chr13:15945355-15945558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 27-191 |
| Cow position: | chr13:33631024-33631196 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 28-190 |
| Cow position: | chr13:42200516-42200687 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 36-192 |
| Cow position: | chr13:26383330-26383170 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 46-193 |
| Cow position: | chr13:29630772-29630928 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 47-226 |
| Cow position: | chr13:24230130-24230316 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 55-197 |
| Cow position: | chr13:20057521-20057381 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 76 |
Show alignments to all cow chromosomes.