Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 1-186 |
| Cow position: | chr3:29507677-29507488 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 133 |
| Conread position: | 3-124 |
| Cow position: | chr3:5601073-5601201 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 3-131 |
| Cow position: | chr3:41550282-41550417 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 3-178 |
| Cow position: | chr3:9074252-9074440 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-187 |
| Cow position: | chr3:28238477-28238675 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-191 |
| Cow position: | chr3:14505821-14506023 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-191 |
| Cow position: | chr3:63147058-63147262 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-192 |
| Cow position: | chr3:20993907-20993703 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 177 |
| Conread position: | 3-192 |
| Cow position: | chr3:27532561-27532765 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 3-192 |
| Cow position: | chr3:36100928-36100727 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 3-192 |
| Cow position: | chr3:46094915-46094725 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-196 |
| Cow position: | chr3:15655052-15655259 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 182 |
| Conread position: | 3-196 |
| Cow position: | chr3:33327803-33327593 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-196 |
| Cow position: | chr3:51492877-51492669 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 3-196 |
| Cow position: | chr3:61116759-61116969 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-196 |
| Cow position: | chr3:73395209-73395009 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 4-196 |
| Cow position: | chr3:36204645-36204443 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 4-196 |
| Cow position: | chr3:66707974-66708183 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 4-224 |
| Cow position: | chr3:77225204-77224976 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 5-190 |
| Cow position: | chr3:73741778-73741967 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 5-192 |
| Cow position: | chr3:49131971-49132162 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 163 |
| Conread position: | 5-196 |
| Cow position: | chr3:8457746-8457542 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 5-196 |
| Cow position: | chr3:18216682-18216883 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 5-224 |
| Cow position: | chr3:37186918-37186688 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 5-224 |
| Cow position: | chr3:50614733-50614495 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-196 |
| Cow position: | chr3:23091888-23092090 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 6-196 |
| Cow position: | chr3:54862328-54862527 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 6-224 |
| Cow position: | chr3:18686997-18686765 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 6-227 |
| Cow position: | chr3:12255569-12255335 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 7-192 |
| Cow position: | chr3:23111423-23111613 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 7-196 |
| Cow position: | chr3:48629499-48629705 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 8-190 |
| Cow position: | chr3:42480703-42480510 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 8-190 |
| Cow position: | chr3:42584627-42584434 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 8-191 |
| Cow position: | chr3:53091576-53091383 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 8-192 |
| Cow position: | chr3:53588295-53588494 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 8-192 |
| Cow position: | chr3:55815931-55815751 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 8-192 |
| Cow position: | chr3:55991779-55991975 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 13-192 |
| Cow position: | chr3:34675801-34675612 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 14-192 |
| Cow position: | chr3:55778116-55777925 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 28-223 |
| Cow position: | chr3:57624528-57624322 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 35-224 |
| Cow position: | chr3:67930130-67930324 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 36-225 |
| Cow position: | chr3:10896878-10896687 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 47-234 |
| Cow position: | chr3:3649179-3649370 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 187 |
| Conread position: | 53-211 |
| Cow position: | chr3:17235172-17235338 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 58-192 |
| Cow position: | chr3:56637699-56637560 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 97 |
Show alignments to all cow chromosomes.