Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 1-196 |
| Cow position: | chr5:25899728-25899933 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 3-175 |
| Cow position: | chr5:36487551-36487738 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 3-184 |
| Cow position: | chr5:25681217-25681392 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 3-190 |
| Cow position: | chr5:23366621-23366825 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 3-190 |
| Cow position: | chr5:31660513-31660713 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-192 |
| Cow position: | chr5:1949914-1950122 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-192 |
| Cow position: | chr5:7552269-7552477 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-193 |
| Cow position: | chr5:56799126-56799320 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 130 |
| Conread position: | 3-196 |
| Cow position: | chr5:1687971-1688176 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 3-196 |
| Cow position: | chr5:17028239-17028030 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-196 |
| Cow position: | chr5:18554036-18553833 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-196 |
| Cow position: | chr5:41604767-41604562 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-196 |
| Cow position: | chr5:47680874-47681069 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-196 |
| Cow position: | chr5:49946051-49945849 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 3-211 |
| Cow position: | chr5:46798386-46798169 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 173 |
| Conread position: | 4-196 |
| Cow position: | chr5:4927424-4927629 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 4-196 |
| Cow position: | chr5:29828189-29827986 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-126 |
| Cow position: | chr5:23527488-23527618 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-190 |
| Cow position: | chr5:15483174-15482979 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 5-190 |
| Cow position: | chr5:23529141-23529337 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 5-192 |
| Cow position: | chr5:26594957-26595165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-192 |
| Cow position: | chr5:62639046-62638848 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 5-196 |
| Cow position: | chr5:28945918-28946125 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 5-196 |
| Cow position: | chr5:29844422-29844216 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-216 |
| Cow position: | chr5:42782582-42782801 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 31, 173 |
| Conread position: | 6-145 |
| Cow position: | chr5:21530964-21531105 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 6-187 |
| Cow position: | chr5:64399149-64398959 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 6-190 |
| Cow position: | chr5:51503144-51502953 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 6-192 |
| Cow position: | chr5:33265326-33265516 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 6-192 |
| Cow position: | chr5:34184364-34184170 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-192 |
| Cow position: | chr5:48143648-48143844 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 6-192 |
| Cow position: | chr5:58748910-58748709 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 6-192 |
| Cow position: | chr5:59449431-59449632 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 6-192 |
| Cow position: | chr5:67149877-67150070 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 6-193 |
| Cow position: | chr5:41945990-41945788 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 6-196 |
| Cow position: | chr5:27411260-27411460 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-190 |
| Cow position: | chr5:3649322-3649513 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 7-192 |
| Cow position: | chr5:27615652-27615456 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 7-197 |
| Cow position: | chr5:48535928-48535739 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 7-223 |
| Cow position: | chr5:39875264-39875032 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 8-196 |
| Cow position: | chr5:6895988-6896189 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 10-196 |
| Cow position: | chr5:36486621-36486431 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 19-196 |
| Cow position: | chr5:21534983-21535177 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 49-192 |
| Cow position: | chr5:35209382-35209535 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.