Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 1-235 |
| Cow position: | chr9:23042687-23042933 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 3-170 |
| Cow position: | chr9:20200204-20200385 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-181 |
| Cow position: | chr9:47925835-47926029 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-189 |
| Cow position: | chr9:3958978-3959171 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-190 |
| Cow position: | chr9:34204041-34204243 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-190 |
| Cow position: | chr9:49847127-49847307 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 3-191 |
| Cow position: | chr9:25468967-25469152 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 3-193 |
| Cow position: | chr9:5209494-5209695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 3-193 |
| Cow position: | chr9:8950807-8951021 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-193 |
| Cow position: | chr9:33668640-33668844 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 175 |
| Conread position: | 3-196 |
| Cow position: | chr9:15684875-15684667 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-196 |
| Cow position: | chr9:34106625-34106839 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-207 |
| Cow position: | chr9:29808366-29808584 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 207 |
| Conread position: | 3-211 |
| Cow position: | chr9:47931028-47931229 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 3-220 |
| Cow position: | chr9:10667112-10666886 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 4-192 |
| Cow position: | chr9:3931875-3932075 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 4-192 |
| Cow position: | chr9:16745591-16745789 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 5-192 |
| Cow position: | chr9:8599520-8599713 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 5-196 |
| Cow position: | chr9:9823588-9823388 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 80, 101 |
| Conread position: | 5-196 |
| Cow position: | chr9:28983096-28983302 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 6-189 |
| Cow position: | chr9:54206410-54206213 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-190 |
| Cow position: | chr9:34725595-34725399 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 6-191 |
| Cow position: | chr9:24837452-24837641 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 6-192 |
| Cow position: | chr9:4858449-4858652 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 6-192 |
| Cow position: | chr9:34309943-34310140 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 7-193 |
| Cow position: | chr9:8617734-8617920 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 7-196 |
| Cow position: | chr9:42037568-42037773 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 8-190 |
| Cow position: | chr9:5340529-5340717 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 8-192 |
| Cow position: | chr9:21462949-21462753 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 8-192 |
| Cow position: | chr9:32266471-32266283 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 14-196 |
| Cow position: | chr9:41958863-41958682 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 14-224 |
| Cow position: | chr9:58204595-58204807 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 16-190 |
| Cow position: | chr9:32115675-32115494 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 19-224 |
| Cow position: | chr9:32624935-32625152 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 189 |
| Conread position: | 27-196 |
| Cow position: | chr9:43936885-43937057 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 29-193 |
| Cow position: | chr9:19637686-19637521 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 35-192 |
| Cow position: | chr9:46664776-46664935 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 35-196 |
| Cow position: | chr9:41282963-41283131 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 36-192 |
| Cow position: | chr9:3070463-3070307 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 76 |
Show alignments to all cow chromosomes.