Cow genome map
| Conread name: | Utr1-UTR010021H10 |
| Conread position: | 3-124 |
| Cow position: | chrX:12304706-12304577 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-188 |
| Cow position: | chrX:36009768-36009966 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-190 |
| Cow position: | chrX:630165-630364 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 3-190 |
| Cow position: | chrX:6203686-6203489 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-192 |
| Cow position: | chrX:2301069-2300865 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-192 |
| Cow position: | chrX:6041064-6041270 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-192 |
| Cow position: | chrX:37761016-37760827 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 3-195 |
| Cow position: | chrX:41560126-41560315 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 55 |
| Conread position: | 3-196 |
| Cow position: | chrX:19678130-19678328 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 3-196 |
| Cow position: | chrX:19879183-19878982 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 3-196 |
| Cow position: | chrX:39545841-39546036 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 3-196 |
| Cow position: | chrX:41084061-41083863 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 3-212 |
| Cow position: | chrX:26618973-26619183 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 3-226 |
| Cow position: | chrX:17630656-17630897 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 31, 219 |
| Conread position: | 3-226 |
| Cow position: | chrX:24259437-24259676 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 206 |
| Conread position: | 4-193 |
| Cow position: | chrX:3154107-3154302 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 4-193 |
| Cow position: | chrX:15329786-15329587 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 4-196 |
| Cow position: | chrX:2786413-2786620 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-196 |
| Cow position: | chrX:40692608-40692815 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 4-224 |
| Cow position: | chrX:23513876-23514107 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 5-190 |
| Cow position: | chrX:17542102-17541902 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-220 |
| Cow position: | chrX:42011424-42011191 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-223 |
| Cow position: | chrX:39126469-39126241 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 5-224 |
| Cow position: | chrX:1615904-1616136 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 6-186 |
| Cow position: | chrX:43426437-43426240 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 6-190 |
| Cow position: | chrX:28787488-28787299 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 6-191 |
| Cow position: | chrX:21664579-21664779 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 6-192 |
| Cow position: | chrX:6563661-6563463 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 6-192 |
| Cow position: | chrX:38999990-38999797 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-196 |
| Cow position: | chrX:17042824-17042631 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 6-223 |
| Cow position: | chrX:10959253-10959485 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 212 |
| Conread position: | 6-224 |
| Cow position: | chrX:40789345-40789117 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 7-177 |
| Cow position: | chrX:39338964-39339147 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 7-196 |
| Cow position: | chrX:25338328-25338123 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 7-196 |
| Cow position: | chrX:39415229-39415428 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 192 |
| Conread position: | 8-192 |
| Cow position: | chrX:9539462-9539266 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 8-196 |
| Cow position: | chrX:17964382-17964580 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 8-224 |
| Cow position: | chrX:7497379-7497151 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 9-196 |
| Cow position: | chrX:32431763-32431559 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 20-190 |
| Cow position: | chrX:25440875-25441050 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 31-192 |
| Cow position: | chrX:9161687-9161527 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 35-193 |
| Cow position: | chrX:13205495-13205333 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 35-211 |
| Cow position: | chrX:27228234-27228049 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 35-218 |
| Cow position: | chrX:16575220-16575042 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 35-224 |
| Cow position: | chrX:29680153-29680352 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.