Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 46-813
Cow position:
Alignm length: 777
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 620, 539

Conread position: 92-242
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 96-273
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 96-284
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 189

Conread position: 96-303
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 12

Conread position: 97-328
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 104

Conread position: 103-259
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 242-813
Cow position:
Alignm length: 594
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 250-813
Cow position:
Alignm length: 591
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 252-381
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 30

Conread position: 252-447
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 20

Conread position: 252-787
Cow position:
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 193

Conread position: 252-808
Cow position:
Alignm length: 584
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 252-813
Cow position:
Alignm length: 595
Alignm identity: 384
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 21, 84

Conread position: 252-813
Cow position:
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 31

Conread position: 252-813
Cow position:
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 252-813
Cow position:
Alignm length: 582
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-813
Cow position:
Alignm length: 585
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 253-542
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 267

Conread position: 253-613
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 20

Conread position: 254-482
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 31

Conread position: 254-487
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 108

Conread position: 254-520
Cow position:
Alignm length: 278
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 60, 30

Conread position: 254-758
Cow position:
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-775
Cow position:
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-813
Cow position:
Alignm length: 581
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 254-813
Cow position:
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 254-813
Cow position:
Alignm length: 584
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-815
Cow position:
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 255-460
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 186

Conread position: 255-760
Cow position:
Alignm length: 529
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-766
Cow position:
Alignm length: 550
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 232

Conread position: 256-487
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 123

Conread position: 256-555
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 105

Conread position: 256-808
Cow position:
Alignm length: 580
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 256-808
Cow position:
Alignm length: 576
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 26

Conread position: 256-813
Cow position:
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 256-813
Cow position:
Alignm length: 584
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 256-813
Cow position:
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 356

Conread position: 256-813
Cow position:
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 258-505
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 265-813
Cow position:
Alignm length: 571
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 267-528
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 71

Conread position: 267-590
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 267-808
Cow position:
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 224

Conread position: 267-813
Cow position:
Alignm length: 578
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 268-569
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 115

Conread position: 272-813
Cow position:
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 7

Conread position: 279-638
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 90

Conread position: 279-813
Cow position:
Alignm length: 554
Alignm identity: 355
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 80

Conread position: 288-837
Cow position:
Alignm length: 564
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 292-754
Cow position:
Alignm length: 486
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 293-618
Cow position:
Alignm length: 338
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 310-496
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 158

Conread position: 310-520
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 36

Conread position: 310-522
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 24

Conread position: 310-533
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 310-560
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 310-601
Cow position:
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 65

Conread position: 310-611
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 59

Conread position: 310-617
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 122

Conread position: 310-638
Cow position:
Alignm length: 342
Alignm identity: 221
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 182

Conread position: 310-689
Cow position:
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 250

Conread position: 310-776
Cow position:
Alignm length: 482
Alignm identity: 319
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 48

Conread position: 310-805
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-807
Cow position:
Alignm length: 515
Alignm identity: 311
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 123

Conread position: 310-807
Cow position:
Alignm length: 506
Alignm identity: 325
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 124, 93

Conread position: 310-808
Cow position:
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 385

Conread position: 310-808
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 16

Conread position: 310-813
Cow position:
Alignm length: 520
Alignm identity: 340
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 66

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-833
Cow position:
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 81

Conread position: 311-809
Cow position:
Alignm length: 519
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 182

Conread position: 312-813
Cow position:
Alignm length: 537
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 319-797
Cow position:
Alignm length: 503
Alignm identity: 326
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 115, 74

Conread position: 320-799
Cow position:
Alignm length: 493
Alignm identity: 317
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 26

Conread position: 322-511
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 342-778
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 108, 88

Conread position: 362-805
Cow position:
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 74

Conread position: 369-813
Cow position:
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 210

Conread position: 377-801
Cow position:
Alignm length: 440
Alignm identity: 291
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 66

Conread position: 391-813
Cow position:
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 393-762
Cow position:
Alignm length: 385
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 40

Conread position: 394-664
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 199

Conread position: 398-571
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 398-654
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 22

Conread position: 400-753
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 10

Conread position: 400-801
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 63, 36

Conread position: 418-813
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 435-787
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 20

Conread position: 442-758
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 291

Conread position: 442-777
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 83, 37

Conread position: 446-638
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 155

Conread position: 474-813
Cow position:
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 531-813
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 172

Conread position: 531-813
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 544-813
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 551-762
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 179

Conread position: 554-760
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 69

Conread position: 567-813
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 17, 151

Conread position: 571-774
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 5

Conread position: 587-802
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 611-813
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 629-805
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.