Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-303
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 132

Conread position: 92-313
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 88

Conread position: 92-358
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 162

Conread position: 93-301
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 12

Conread position: 96-231
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 85

Conread position: 96-241
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 96-242
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 51

Conread position: 96-246
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 55

Conread position: 96-284
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 124

Conread position: 96-303
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 192

Conread position: 114-318
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 158

Conread position: 162-636
Cow position:
Alignm length: 488
Alignm identity: 318
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 66, 12

Conread position: 249-683
Cow position:
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 149

Conread position: 252-394
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 252-532
Cow position:
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-612
Cow position:
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 181

Conread position: 252-718
Cow position:
Alignm length: 495
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 228

Conread position: 252-778
Cow position:
Alignm length: 539
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 36

Conread position: 252-805
Cow position:
Alignm length: 579
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 220

Conread position: 252-809
Cow position:
Alignm length: 574
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 19

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 465

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 145

Conread position: 252-813
Cow position:
Alignm length: 582
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 581
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 252-813
Cow position:
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-815
Cow position:
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 115

Conread position: 253-610
Cow position:
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 62

Conread position: 254-492
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 18

Conread position: 254-497
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 254-628
Cow position:
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-713
Cow position:
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-760
Cow position:
Alignm length: 531
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 342

Conread position: 254-805
Cow position:
Alignm length: 575
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 192

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 581
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 390

Conread position: 254-813
Cow position:
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 351

Conread position: 254-813
Cow position:
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 248

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-817
Cow position:
Alignm length: 590
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 255-813
Cow position:
Alignm length: 585
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 129

Conread position: 255-813
Cow position:
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 101

Conread position: 255-813
Cow position:
Alignm length: 581
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 256-797
Cow position:
Alignm length: 569
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 142

Conread position: 256-805
Cow position:
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-808
Cow position:
Alignm length: 576
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 586
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 587
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 245

Conread position: 265-533
Cow position:
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 267-805
Cow position:
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 120

Conread position: 267-813
Cow position:
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 66

Conread position: 268-813
Cow position:
Alignm length: 572
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 154

Conread position: 272-696
Cow position:
Alignm length: 445
Alignm identity: 288
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 122

Conread position: 280-813
Cow position:
Alignm length: 551
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 39

Conread position: 286-778
Cow position:
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 5

Conread position: 295-809
Cow position:
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 25

Conread position: 305-813
Cow position:
Alignm length: 549
Alignm identity: 357
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 75, 5

Conread position: 310-518
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 310-555
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 29

Conread position: 310-560
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 48

Conread position: 310-617
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 215, 51

Conread position: 310-702
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 310-721
Cow position:
Alignm length: 416
Alignm identity: 292
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 274, 20

Conread position: 310-768
Cow position:
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 257

Conread position: 310-769
Cow position:
Alignm length: 472
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 124

Conread position: 310-777
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 177

Conread position: 310-809
Cow position:
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 98

Conread position: 310-812
Cow position:
Alignm length: 521
Alignm identity: 313
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 129, 67

Conread position: 310-813
Cow position:
Alignm length: 517
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 126

Conread position: 310-813
Cow position:
Alignm length: 519
Alignm identity: 333
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 164, 22

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-813
Cow position:
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 117

Conread position: 310-813
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-818
Cow position:
Alignm length: 522
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 114

Conread position: 311-500
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 311-516
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 149

Conread position: 311-808
Cow position:
Alignm length: 517
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 311-813
Cow position:
Alignm length: 522
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 312-530
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 42

Conread position: 312-531
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 314-760
Cow position:
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 100

Conread position: 316-807
Cow position:
Alignm length: 506
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 79

Conread position: 318-808
Cow position:
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 274

Conread position: 320-813
Cow position:
Alignm length: 499
Alignm identity: 311
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 72

Conread position: 326-813
Cow position:
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 89

Conread position: 341-758
Cow position:
Alignm length: 436
Alignm identity: 273
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 57

Conread position: 343-809
Cow position:
Alignm length: 489
Alignm identity: 317
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 18

Conread position: 354-801
Cow position:
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 376-533
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 377-717
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 60, 94

Conread position: 391-672
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 391-778
Cow position:
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 408-802
Cow position:
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 427-813
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 251

Conread position: 464-647
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 469-808
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 521-813
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 530-809
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 137

Conread position: 532-813
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 23, 236

Conread position: 540-813
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 164

Conread position: 556-714
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 103

Conread position: 558-704
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 559-813
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 594-808
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 110

Conread position: 596-746
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 604-813
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 53

Conread position: 605-815
Cow position:
Alignm length: 213
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 612-802
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 624-813
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 141

Conread position: 627-813
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.