Cow genome map
| Conread name: | Utr1-UTR010022D12 |
| Conread position: | 93-284 |
| Cow position: | chr12:2530-2729 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 96-303 |
| Cow position: | chr12:21901680-21901893 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 163 |
| Conread position: | 96-313 |
| Cow position: | chr12:21499852-21500081 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 234-616 |
| Cow position: | chr12:2282812-2283210 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 248-758 |
| Cow position: | chr12:3631610-3631073 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 193 |
| Conread position: | 252-686 |
| Cow position: | chr12:27932678-27932211 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr12:1402757-1403340 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr12:6406384-6405796 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr12:11098509-11099082 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr12:22205481-22204896 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr12:28765755-28765171 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 254-522 |
| Cow position: | chr12:33986423-33986702 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-760 |
| Cow position: | chr12:25100792-25100264 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 254-801 |
| Cow position: | chr12:1869559-1870118 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 384 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 52, 241 |
| Conread position: | 254-813 |
| Cow position: | chr12:4157638-4158224 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 255-648 |
| Cow position: | chr12:42859558-42859142 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 255-813 |
| Cow position: | chr12:27855690-27855118 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 256-616 |
| Cow position: | chr12:37558819-37559196 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 256-805 |
| Cow position: | chr12:21198230-21198801 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 257-397 |
| Cow position: | chr12:20997862-20997728 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 257-808 |
| Cow position: | chr12:14662362-14661787 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 267-533 |
| Cow position: | chr12:16821749-16822027 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 168 |
| Conread position: | 267-533 |
| Cow position: | chr12:21426968-21427244 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 277-813 |
| Cow position: | chr12:8197500-8198063 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 308-801 |
| Cow position: | chr12:8677759-8677264 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 117 |
| Conread position: | 310-590 |
| Cow position: | chr12:21254332-21254056 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 310-813 |
| Cow position: | chr12:3361229-3361773 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 310-813 |
| Cow position: | chr12:32653869-32654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 310-813 |
| Cow position: | chr12:43031060-43030540 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 319-500 |
| Cow position: | chr12:6493078-6492897 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 330-807 |
| Cow position: | chr12:601008-600515 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 349-808 |
| Cow position: | chr12:36367200-36367677 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 364 |
| Conread position: | 349-808 |
| Cow position: | chr12:36427603-36428072 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 277 |
| Conread position: | 349-813 |
| Cow position: | chr12:36448945-36449423 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 226 |
| Conread position: | 349-813 |
| Cow position: | chr12:36479541-36480015 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 303 |
| Conread position: | 352-809 |
| Cow position: | chr12:20997721-20997253 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 377-756 |
| Cow position: | chr12:12292309-12292695 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 136 |
| Conread position: | 402-813 |
| Cow position: | chr12:21209085-21209500 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 405-813 |
| Cow position: | chr12:21942159-21942585 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 391 |
| Conread position: | 416-813 |
| Cow position: | chr12:35314220-35313826 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 200 |
| Conread position: | 422-808 |
| Cow position: | chr12:25263030-25262625 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 427-760 |
| Cow position: | chr12:1889069-1888722 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 215 |
| Conread position: | 531-813 |
| Cow position: | chr12:21428414-21428706 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 583-760 |
| Cow position: | chr12:1780943-1780765 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 672-813 |
| Cow position: | chr12:32678243-32678100 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.