Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               96-246
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               96-302
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 168
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 173
               

               Conread position:
               96-328
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               96-346
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 173
               

               Conread position:
               96-358
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 187
               

               Conread position:
               103-242
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               103-303
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               103-303
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               119-303
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               235-760
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               249-828
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               252-616
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-648
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 385
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               253-797
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               254-405
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               254-615
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               254-653
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 185
               

               Conread position:
               254-791
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               254-805
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               368
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               59, 98
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 390
               

               Conread position:
               255-681
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               255-807
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               255-815
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 475
               

               Conread position:
               256-489
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               256-490
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 210
               

               Conread position:
               256-533
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               256-655
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               256-765
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               352
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               256-774
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 196
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 399
               

               Conread position:
               257-760
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               258-550
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               265-515
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               265-813
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 409
               

               Conread position:
               267-590
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               267-645
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 40
               

               Conread position:
               271-478
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               272-813
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 119
               

               Conread position:
               274-654
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 324
               

               Conread position:
               274-813
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 414
               

               Conread position:
               282-611
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               299-778
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               310-555
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               310-758
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 44
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 8
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 334
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 420
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               336
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 15
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               311-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               312-787
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               312-815
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               315-704
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               344-813
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 143
               

               Conread position:
               371-610
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               142, 62
               

               Conread position:
               389-638
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 27
               

               Conread position:
               399-590
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               435-777
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               483-808
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               42, 126
               

               Conread position:
               540-809
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               583-756
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 166
               

               Conread position:
               594-813
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               605-760
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               611-760
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               613-813
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 135
               
Show alignments to all cow chromosomes.