Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-242
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 96-245
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 96-246
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 45

Conread position: 96-284
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 116

Conread position: 96-284
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 170

Conread position: 96-313
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 96-337
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 230

Conread position: 96-347
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 263

Conread position: 97-340
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 128

Conread position: 103-303
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 181

Conread position: 231-639
Cow position:
Alignm length: 427
Alignm identity: 278
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 41

Conread position: 250-813
Cow position:
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 22

Conread position: 252-458
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 30

Conread position: 252-628
Cow position:
Alignm length: 400
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-647
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 252-760
Cow position:
Alignm length: 531
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 534
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 252-760
Cow position:
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-795
Cow position:
Alignm length: 584
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 252-801
Cow position:
Alignm length: 574
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 252-804
Cow position:
Alignm length: 570
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 252-808
Cow position:
Alignm length: 582
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 578
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 405

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 252-813
Cow position:
Alignm length: 585
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 31

Conread position: 252-813
Cow position:
Alignm length: 582
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 588
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 253-488
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 117

Conread position: 253-695
Cow position:
Alignm length: 474
Alignm identity: 308
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 59

Conread position: 253-812
Cow position:
Alignm length: 587
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 253-838
Cow position:
Alignm length: 620
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 560

Conread position: 254-421
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 254-442
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 28

Conread position: 254-492
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 110

Conread position: 254-492
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 23

Conread position: 254-502
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 254-503
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 88

Conread position: 254-511
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 125

Conread position: 254-545
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 28

Conread position: 254-551
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 254-589
Cow position:
Alignm length: 348
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 18

Conread position: 254-658
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 95

Conread position: 254-728
Cow position:
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 254-805
Cow position:
Alignm length: 560
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 254-820
Cow position:
Alignm length: 591
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 255-492
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 240

Conread position: 255-813
Cow position:
Alignm length: 587
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 130

Conread position: 255-813
Cow position:
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 255-813
Cow position:
Alignm length: 583
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 256-410
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 256-612
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 256-805
Cow position:
Alignm length: 574
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 256-813
Cow position:
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 256-813
Cow position:
Alignm length: 583
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 499

Conread position: 256-813
Cow position:
Alignm length: 580
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 8

Conread position: 256-815
Cow position:
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 217

Conread position: 257-654
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 257-808
Cow position:
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 257-813
Cow position:
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 258-802
Cow position:
Alignm length: 578
Alignm identity: 378
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 198

Conread position: 258-808
Cow position:
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 260-665
Cow position:
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 130

Conread position: 267-813
Cow position:
Alignm length: 574
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 267-813
Cow position:
Alignm length: 573
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 269-492
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 274-522
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 292-813
Cow position:
Alignm length: 538
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 18

Conread position: 297-654
Cow position:
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 13

Conread position: 298-522
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 12

Conread position: 305-723
Cow position:
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 5

Conread position: 308-778
Cow position:
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 68

Conread position: 310-565
Cow position:
Alignm length: 264
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 83

Conread position: 310-610
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 204

Conread position: 310-654
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 310-723
Cow position:
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 57

Conread position: 310-730
Cow position:
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-802
Cow position:
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 310-805
Cow position:
Alignm length: 504
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 268

Conread position: 310-808
Cow position:
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 44

Conread position: 310-808
Cow position:
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 29

Conread position: 310-809
Cow position:
Alignm length: 518
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 63

Conread position: 310-813
Cow position:
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 310-813
Cow position:
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 157

Conread position: 311-623
Cow position:
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 152

Conread position: 312-795
Cow position:
Alignm length: 504
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 63

Conread position: 312-803
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 42

Conread position: 317-761
Cow position:
Alignm length: 463
Alignm identity: 299
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 39

Conread position: 321-624
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 40

Conread position: 351-707
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 378-813
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 383-813
Cow position:
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 383-813
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 392-694
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 44

Conread position: 411-654
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 414-813
Cow position:
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 166

Conread position: 416-674
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 435-813
Cow position:
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 435-813
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 442-813
Cow position:
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 362

Conread position: 464-813
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 466-807
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 281

Conread position: 467-760
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 58, 235

Conread position: 470-813
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 230

Conread position: 481-808
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 486-813
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 499-813
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 67

Conread position: 531-813
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 7

Conread position: 546-813
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 168

Conread position: 566-813
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 9

Conread position: 585-808
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 6, 97

Conread position: 607-813
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 173

Conread position: 611-807
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 620-805
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 145

Conread position: 631-813
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 72

Show alignments to all cow chromosomes.