Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 91-329
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 248

Conread position: 93-303
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 12

Conread position: 93-352
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 15

Conread position: 95-317
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 194

Conread position: 96-242
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 96-242
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 114

Conread position: 96-302
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 173

Conread position: 96-303
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 128

Conread position: 96-317
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 60

Conread position: 97-283
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 11

Conread position: 214-613
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 44

Conread position: 230-813
Cow position:
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 21

Conread position: 249-760
Cow position:
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 118

Conread position: 249-808
Cow position:
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 249-813
Cow position:
Alignm length: 581
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 231

Conread position: 250-813
Cow position:
Alignm length: 588
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 158

Conread position: 252-441
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 120

Conread position: 252-470
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 92

Conread position: 252-615
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 252-616
Cow position:
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 252-649
Cow position:
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 252-689
Cow position:
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-708
Cow position:
Alignm length: 475
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 252-739
Cow position:
Alignm length: 510
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 252-810
Cow position:
Alignm length: 585
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 71

Conread position: 252-813
Cow position:
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 252-813
Cow position:
Alignm length: 585
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 253-801
Cow position:
Alignm length: 570
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 253-813
Cow position:
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 254-492
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 254-531
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 138

Conread position: 254-555
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 258

Conread position: 254-758
Cow position:
Alignm length: 530
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-808
Cow position:
Alignm length: 579
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 115

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 254-813
Cow position:
Alignm length: 586
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 255-533
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 56

Conread position: 255-533
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-576
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 36

Conread position: 255-684
Cow position:
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 217

Conread position: 255-801
Cow position:
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 116

Conread position: 255-802
Cow position:
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-809
Cow position:
Alignm length: 575
Alignm identity: 384
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 16

Conread position: 255-813
Cow position:
Alignm length: 586
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 255-813
Cow position:
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 255-813
Cow position:
Alignm length: 582
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 129

Conread position: 255-813
Cow position:
Alignm length: 583
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 255-813
Cow position:
Alignm length: 582
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 539

Conread position: 255-826
Cow position:
Alignm length: 596
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 256-402
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 256-494
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 104

Conread position: 256-533
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 15

Conread position: 256-538
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 177, 55

Conread position: 256-749
Cow position:
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 256-758
Cow position:
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 256-808
Cow position:
Alignm length: 576
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 256-813
Cow position:
Alignm length: 577
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 323

Conread position: 256-813
Cow position:
Alignm length: 581
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 256-813
Cow position:
Alignm length: 582
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 256-813
Cow position:
Alignm length: 585
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 256-813
Cow position:
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 26

Conread position: 256-816
Cow position:
Alignm length: 585
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 185

Conread position: 258-759
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 258-778
Cow position:
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 278

Conread position: 258-808
Cow position:
Alignm length: 593
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 264-760
Cow position:
Alignm length: 515
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 117

Conread position: 264-805
Cow position:
Alignm length: 574
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 267-805
Cow position:
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-813
Cow position:
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 501

Conread position: 267-813
Cow position:
Alignm length: 574
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 504

Conread position: 267-813
Cow position:
Alignm length: 559
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 56

Conread position: 270-813
Cow position:
Alignm length: 592
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 274-788
Cow position:
Alignm length: 546
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 282-747
Cow position:
Alignm length: 486
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 283-813
Cow position:
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 305-813
Cow position:
Alignm length: 531
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 5

Conread position: 308-813
Cow position:
Alignm length: 535
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 310-522
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 133, 0

Conread position: 310-532
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 182

Conread position: 310-578
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 179

Conread position: 310-654
Cow position:
Alignm length: 353
Alignm identity: 229
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 31

Conread position: 310-665
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 77

Conread position: 310-777
Cow position:
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 45

Conread position: 310-803
Cow position:
Alignm length: 512
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 66

Conread position: 310-808
Cow position:
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 59

Conread position: 310-813
Cow position:
Alignm length: 511
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 123

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 155

Conread position: 310-813
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 398

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 73

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 290

Conread position: 310-813
Cow position:
Alignm length: 518
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 157

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 288

Conread position: 310-813
Cow position:
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 310-816
Cow position:
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 377

Conread position: 311-808
Cow position:
Alignm length: 509
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 311-813
Cow position:
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 292

Conread position: 312-802
Cow position:
Alignm length: 502
Alignm identity: 332
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 9

Conread position: 312-809
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 281

Conread position: 312-813
Cow position:
Alignm length: 521
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 312-813
Cow position:
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 33

Conread position: 320-533
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 154

Conread position: 333-813
Cow position:
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 345-813
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 348-758
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 350-808
Cow position:
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 164

Conread position: 355-760
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 360-805
Cow position:
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 172

Conread position: 366-813
Cow position:
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 377-636
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 89

Conread position: 377-813
Cow position:
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 33

Conread position: 393-813
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 394-805
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 398-687
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 9

Conread position: 404-813
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 406-787
Cow position:
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 230

Conread position: 444-765
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 20

Conread position: 452-804
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 481-813
Cow position:
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 504-808
Cow position:
Alignm length: 321
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 530-801
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 134

Conread position: 559-774
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 559-778
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 50

Conread position: 562-813
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 581-813
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 22

Conread position: 589-808
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 611-807
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 82

Conread position: 612-811
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 45

Conread position: 619-757
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 619-813
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 627-813
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 663-813
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 83

Show alignments to all cow chromosomes.