Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-246
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 92-303
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 181

Conread position: 96-247
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 96-293
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 12

Conread position: 96-303
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 96-313
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 21

Conread position: 96-323
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 172

Conread position: 96-332
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 130

Conread position: 230-813
Cow position:
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 18

Conread position: 249-803
Cow position:
Alignm length: 581
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 250-663
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 432

Conread position: 252-521
Cow position:
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 252-608
Cow position:
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-664
Cow position:
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 106

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 253-426
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 24

Conread position: 253-648
Cow position:
Alignm length: 413
Alignm identity: 274
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 133

Conread position: 253-805
Cow position:
Alignm length: 566
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 253-813
Cow position:
Alignm length: 579
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 254-431
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 254-758
Cow position:
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 288

Conread position: 254-760
Cow position:
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-760
Cow position:
Alignm length: 533
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Conread position: 254-813
Cow position:
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 59

Conread position: 255-813
Cow position:
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-813
Cow position:
Alignm length: 593
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 36

Conread position: 255-813
Cow position:
Alignm length: 581
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-813
Cow position:
Alignm length: 581
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 182

Conread position: 256-813
Cow position:
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 256-813
Cow position:
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 256-813
Cow position:
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 339

Conread position: 259-652
Cow position:
Alignm length: 424
Alignm identity: 281
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 22, 189

Conread position: 265-759
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 6

Conread position: 265-807
Cow position:
Alignm length: 571
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 267-813
Cow position:
Alignm length: 571
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 283-813
Cow position:
Alignm length: 552
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 283-813
Cow position:
Alignm length: 558
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 298-723
Cow position:
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 13

Conread position: 299-590
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 133, 25

Conread position: 302-813
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 310-485
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 45

Conread position: 310-514
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 0

Conread position: 310-627
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 105

Conread position: 310-760
Cow position:
Alignm length: 482
Alignm identity: 303
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 125

Conread position: 310-808
Cow position:
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 123

Conread position: 310-808
Cow position:
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 76

Conread position: 310-808
Cow position:
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 384

Conread position: 310-813
Cow position:
Alignm length: 524
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 184

Conread position: 310-813
Cow position:
Alignm length: 533
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 272

Conread position: 310-813
Cow position:
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 143

Conread position: 310-813
Cow position:
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 104

Conread position: 310-813
Cow position:
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 288

Conread position: 311-610
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 311-614
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 36

Conread position: 311-795
Cow position:
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 289

Conread position: 311-813
Cow position:
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 358-809
Cow position:
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 275

Conread position: 358-813
Cow position:
Alignm length: 473
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 61

Conread position: 392-739
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 410-808
Cow position:
Alignm length: 412
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 191

Conread position: 425-813
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 441-805
Cow position:
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 45

Conread position: 452-813
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 84

Conread position: 489-813
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 530-760
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 213

Conread position: 530-813
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 532-811
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 199

Conread position: 542-807
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 81

Conread position: 546-805
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 72

Conread position: 550-813
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 9

Conread position: 561-813
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 611-813
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.