Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               92-246
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               92-284
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 177
               

               Conread position:
               93-313
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               96-273
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-284
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 171
               

               Conread position:
               96-284
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 171
               

               Conread position:
               96-302
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               61, 173
               

               Conread position:
               96-312
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               96-359
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               233-615
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               252-612
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               252-648
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               252-689
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               252-807
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               254-642
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               254-724
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 181
               

               Conread position:
               254-808
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 108
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 274
               

               Conread position:
               255-815
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               256-380
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-535
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               52, 117
               

               Conread position:
               256-688
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               257-813
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               267-760
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               310-778
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 127
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 154
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               311-718
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               130, 66
               

               Conread position:
               311-775
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               313-744
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               9, 111
               

               Conread position:
               316-813
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               320-644
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               108, 171
               

               Conread position:
               336-649
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               360-652
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               165, 73
               

               Conread position:
               442-739
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 236
               

               Conread position:
               500-702
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               5, 122
               

               Conread position:
               550-760
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               551-808
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               594-723
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               611-813
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               620-808
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 8
               
Show alignments to all cow chromosomes.