Cow genome map
| Conread name: | Utr1-UTR010022D12 |
| Conread position: | 92-323 |
| Cow position: | chr19:378044-377813 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 108 |
| Conread position: | 94-362 |
| Cow position: | chr19:32223597-32223339 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 96-242 |
| Cow position: | chr19:32665365-32665516 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 96-285 |
| Cow position: | chr19:1031941-1032132 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 96-303 |
| Cow position: | chr19:4532911-4532700 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 66, 169 |
| Conread position: | 96-304 |
| Cow position: | chr19:30372115-30372335 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 96-317 |
| Cow position: | chr19:416485-416718 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 102-243 |
| Cow position: | chr19:28376369-28376519 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 108-303 |
| Cow position: | chr19:20125467-20125671 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 114-333 |
| Cow position: | chr19:34275-34501 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 234-529 |
| Cow position: | chr19:189780-190069 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 46 |
| Conread position: | 238-808 |
| Cow position: | chr19:341570-342160 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 250-771 |
| Cow position: | chr19:40852075-40851537 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 191 |
| Conread position: | 250-813 |
| Cow position: | chr19:2274024-2273436 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 252-665 |
| Cow position: | chr19:162735-162311 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 252-740 |
| Cow position: | chr19:5729195-5729707 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 252-775 |
| Cow position: | chr19:172576-173115 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 252-787 |
| Cow position: | chr19:33873792-33874341 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-787 |
| Cow position: | chr19:39669144-39668576 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 110 |
| Conread position: | 252-808 |
| Cow position: | chr19:439075-438497 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-808 |
| Cow position: | chr19:28581295-28580717 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-808 |
| Cow position: | chr19:39390874-39391450 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr19:33941976-33942551 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 252-813 |
| Cow position: | chr19:39185180-39184592 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 253-804 |
| Cow position: | chr19:75885-75313 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 254-456 |
| Cow position: | chr19:5208532-5208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-762 |
| Cow position: | chr19:35385381-35384855 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 139 |
| Conread position: | 254-813 |
| Cow position: | chr19:3138304-3138877 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 255-760 |
| Cow position: | chr19:7488681-7489206 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 255-778 |
| Cow position: | chr19:204324-204873 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 255-813 |
| Cow position: | chr19:893240-892657 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 250 |
| Conread position: | 256-530 |
| Cow position: | chr19:352280-351999 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 256-615 |
| Cow position: | chr19:28593626-28594003 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 217 |
| Conread position: | 256-813 |
| Cow position: | chr19:52151468-52150887 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 356 |
| Conread position: | 257-701 |
| Cow position: | chr19:35980525-35980974 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 21 |
| Conread position: | 261-760 |
| Cow position: | chr19:20105085-20105601 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 258 |
| Conread position: | 265-623 |
| Cow position: | chr19:136630-136264 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 142 |
| Conread position: | 267-802 |
| Cow position: | chr19:7342444-7343002 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 267-813 |
| Cow position: | chr19:43144089-43144656 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 270-813 |
| Cow position: | chr19:27052133-27051565 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 498 |
| Conread position: | 279-805 |
| Cow position: | chr19:40887343-40886807 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 279-813 |
| Cow position: | chr19:4386012-4386570 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 309-501 |
| Cow position: | chr19:14213573-14213384 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 310-480 |
| Cow position: | chr19:38319-38493 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 310-491 |
| Cow position: | chr19:10514060-10513877 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 310-813 |
| Cow position: | chr19:773020-773544 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 143 |
| Conread position: | 310-813 |
| Cow position: | chr19:32211649-32211129 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 276 |
| Conread position: | 310-818 |
| Cow position: | chr19:168176-167650 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 520 |
| Conread position: | 313-813 |
| Cow position: | chr19:7069780-7070259 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 28 |
| Conread position: | 321-675 |
| Cow position: | chr19:17019406-17019764 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 258, 51 |
| Conread position: | 321-813 |
| Cow position: | chr19:5901059-5900556 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 335-638 |
| Cow position: | chr19:10956775-10956461 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 372-814 |
| Cow position: | chr19:12773606-12774065 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 435-809 |
| Cow position: | chr19:28406152-28405765 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 479-813 |
| Cow position: | chr19:28567322-28566977 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 530-760 |
| Cow position: | chr19:53844242-53844484 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 207 |
| Conread position: | 530-813 |
| Cow position: | chr19:347664-347381 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 560-813 |
| Cow position: | chr19:38982-39244 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 563-813 |
| Cow position: | chr19:40816878-40816623 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 565-813 |
| Cow position: | chr19:32193705-32193960 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 583-813 |
| Cow position: | chr19:39002347-39002112 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 611-813 |
| Cow position: | chr19:28594291-28594497 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 619-790 |
| Cow position: | chr19:9707381-9707206 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.