Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               92-323
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               94-362
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               96-242
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               96-285
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 169
               

               Conread position:
               96-304
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               96-317
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 175
               

               Conread position:
               102-243
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               108-303
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               114-333
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               234-529
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               238-808
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               250-771
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 191
               

               Conread position:
               250-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               252-665
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               252-740
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               252-775
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               252-787
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-787
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               252-808
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-808
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-808
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               253-804
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               254-456
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               254-762
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               255-760
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-778
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 250
               

               Conread position:
               256-530
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 169
               

               Conread position:
               256-615
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 217
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 356
               

               Conread position:
               257-701
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 21
               

               Conread position:
               261-760
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 258
               

               Conread position:
               265-623
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 142
               

               Conread position:
               267-802
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               267-813
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               270-813
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 498
               

               Conread position:
               279-805
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               279-813
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               309-501
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               310-480
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-491
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 143
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 276
               

               Conread position:
               310-818
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 520
               

               Conread position:
               313-813
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 28
               

               Conread position:
               321-675
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               258, 51
               

               Conread position:
               321-813
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 62
               

               Conread position:
               335-638
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               372-814
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               435-809
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               479-813
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               530-760
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 207
               

               Conread position:
               530-813
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               560-813
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               563-813
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               565-813
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               583-813
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               611-813
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               619-790
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.