Cow genome map
Conread name: | Utr1-UTR010022D12 |
Conread position: | 96-236 |
Cow position: | chr20:3252344-3252196 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 96-246 |
Cow position: | chr20:5483980-5484139 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 62, 34 |
Conread position: | 96-284 |
Cow position: | chr20:15064558-15064755 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 96-361 |
Cow position: | chr20:4799856-4799593 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 182 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 83, 60 |
Conread position: | 234-805 |
Cow position: | chr20:10855041-10854460 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 238-523 |
Cow position: | chr20:3271010-3271302 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 215 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 252-617 |
Cow position: | chr20:8003903-8003519 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-655 |
Cow position: | chr20:28161093-28161519 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-664 |
Cow position: | chr20:12438438-12438006 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 29 |
Conread position: | 252-808 |
Cow position: | chr20:15292333-15292903 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-808 |
Cow position: | chr20:23799208-23799784 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 252-813 |
Cow position: | chr20:5535260-5535840 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-813 |
Cow position: | chr20:13763227-13763813 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-813 |
Cow position: | chr20:15097554-15096975 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 252-813 |
Cow position: | chr20:18314987-18314443 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 142 |
Conread position: | 252-813 |
Cow position: | chr20:21914650-21915225 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-813 |
Cow position: | chr20:23469343-23468757 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-813 |
Cow position: | chr20:28565273-28564684 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 25 |
Conread position: | 252-813 |
Cow position: | chr20:30684643-30685224 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 252-813 |
Cow position: | chr20:35124818-35125401 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 24 |
Conread position: | 252-816 |
Cow position: | chr20:27869520-27870112 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 254-612 |
Cow position: | chr20:31377871-31377510 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 82, 56 |
Conread position: | 254-808 |
Cow position: | chr20:29948824-29949404 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 254-813 |
Cow position: | chr20:10840385-10839811 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 45 |
Conread position: | 255-412 |
Cow position: | chr20:10845797-10845630 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 255-447 |
Cow position: | chr20:42076736-42076543 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 58, 122 |
Conread position: | 255-625 |
Cow position: | chr20:25850666-25850279 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 27 |
Conread position: | 255-647 |
Cow position: | chr20:16179496-16179077 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 217 |
Conread position: | 255-802 |
Cow position: | chr20:13679708-13679149 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 16 |
Conread position: | 256-644 |
Cow position: | chr20:21393919-21394328 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 256-813 |
Cow position: | chr20:19438258-19438821 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 185 |
Conread position: | 263-809 |
Cow position: | chr20:8992889-8992313 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 383 |
Conread position: | 267-802 |
Cow position: | chr20:25961433-25961989 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 413 |
Conread position: | 267-813 |
Cow position: | chr20:38351008-38351579 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 163 |
Conread position: | 271-441 |
Cow position: | chr20:19352882-19353050 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 163, 39 |
Conread position: | 285-623 |
Cow position: | chr20:2790549-2790196 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 243 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 28, 113 |
Conread position: | 291-813 |
Cow position: | chr20:42905575-42906103 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 30 |
Conread position: | 310-521 |
Cow position: | chr20:7115099-7114885 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 163 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 310-813 |
Cow position: | chr20:823148-823665 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 310-813 |
Cow position: | chr20:8215906-8216419 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 291 |
Conread position: | 310-813 |
Cow position: | chr20:22697656-22698168 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 67 |
Conread position: | 310-817 |
Cow position: | chr20:18324787-18324276 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 341 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 78, 86 |
Conread position: | 312-547 |
Cow position: | chr20:22716940-22716705 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 175 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 131, 121 |
Conread position: | 368-612 |
Cow position: | chr20:15065713-15065968 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 371-813 |
Cow position: | chr20:12568967-12569426 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 382 |
Conread position: | 385-813 |
Cow position: | chr20:8974354-8973913 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 143 |
Conread position: | 396-801 |
Cow position: | chr20:14870476-14870054 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 118 |
Conread position: | 429-555 |
Cow position: | chr20:20931049-20931180 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 434-813 |
Cow position: | chr20:24616348-24615963 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 109 |
Conread position: | 442-760 |
Cow position: | chr20:17661557-17661225 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 442-813 |
Cow position: | chr20:13434066-13433694 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 259 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 83, 115 |
Conread position: | 447-833 |
Cow position: | chr20:19355305-19355689 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 267 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 68, 144 |
Conread position: | 466-760 |
Cow position: | chr20:13664903-13664593 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 226 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 59, 221 |
Conread position: | 508-812 |
Cow position: | chr20:22207716-22208028 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 24, 36 |
Conread position: | 515-813 |
Cow position: | chr20:37580813-37581115 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 203 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 78, 294 |
Conread position: | 530-807 |
Cow position: | chr20:7113575-7113289 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 200 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 530-813 |
Cow position: | chr20:37442692-37442391 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 222 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 34, 126 |
Conread position: | 590-813 |
Cow position: | chr20:10102017-10101797 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 50, 100 |
Conread position: | 610-821 |
Cow position: | chr20:15066183-15066398 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 30, 181 |
Conread position: | 611-813 |
Cow position: | chr20:25850128-25849922 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 618-813 |
Cow position: | chr20:28161526-28161725 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 140 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.