Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               96-236
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               96-246
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               96-284
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               96-361
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               234-805
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               238-523
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               252-617
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-655
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-664
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               252-808
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-808
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               252-816
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               254-612
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               254-808
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               255-412
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               255-447
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               58, 122
               

               Conread position:
               255-625
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-647
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 217
               

               Conread position:
               255-802
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 16
               

               Conread position:
               256-644
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 185
               

               Conread position:
               263-809
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 383
               

               Conread position:
               267-802
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 413
               

               Conread position:
               267-813
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               271-441
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               163, 39
               

               Conread position:
               285-623
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               291-813
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               310-521
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 291
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               310-817
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               312-547
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               131, 121
               

               Conread position:
               368-612
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               371-813
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 382
               

               Conread position:
               385-813
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               396-801
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               429-555
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               434-813
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               442-760
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               442-813
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               447-833
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               68, 144
               

               Conread position:
               466-760
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 221
               

               Conread position:
               508-812
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               515-813
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 294
               

               Conread position:
               530-807
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               530-813
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               590-813
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               610-821
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 181
               

               Conread position:
               611-813
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               618-813
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.